Home LiteratureArticle Details
PMID: 265575 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Mechanism of tertiary structural change in hemoglobin.

Gelin BR, Karplus M

Abstract

A reaction path is presented by which the effects of oxygen binding in hemoglobin are transmitted from a heme group to the surface of its subunit. Starting from the known deoxy geometry, it is shown by calculations with empirical energy functions and comparisons with available data how the change in heme geometry on ligation introduces a perturbation that leads to the tertiary structural alterations essential for cooperatively. It is found that there is little strain on the unliganded heme; instead, the reduced oxygen affinity of hemoglobin results from the strain on the liganded subunit in a tetramer with the deoxy quarternary structure.

MeSH Terms
Amino Acid Sequence Globins Heme Hemoglobins Histidine Humans Ligands Models, Biological Models, Molecular Oxyhemoglobins Protein Conformation Thermodynamics Valine
Chemicals
Hemoglobins Ligands Oxyhemoglobins Heme Histidine Globins Valine
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Gelin B R
Karplus M
References (23)
23 references, click to expand
  1. ON THE NATURE OF ALLOSTERIC TRANSITIONS: A PLAUSIBLE MODEL.
    J Mol Biol. 1965 May;12:88-118 PMID: 14343300
  2. High resolution nuclear magnetic resonance spectra of hemoglobin. 3. The half-ligated state and allosteric interactions.
    J Mol Biol. 1972 Sep 28;70(2):315-36 PMID: 5078574
  3. Influence of globin structure on the state of the heme. 3. Changes in heme spectra accompanying allosteric transitions in methemoglobin and their implications for heme-heme interaction.
    Biochemistry. 1974 May 7;13(10):2187-200 PMID: 4363756
  4. Stereochemistry of hemes and other metalloporphyrins.
    Science. 1971 Dec 24;174(4016):1295-302 PMID: 4332625
  5. Stereochemistry of cooperative effects in haemoglobin.
    Nature. 1970 Nov 21;228(5273):726-39 PMID: 5528785
  6. Optically detected conformational changes in haemoglobin single crystals.
    Nature. 1974 Jan 4;247(5435):62-4 PMID: 4808946
  7. Sidechain torsional potentials and motion of amino acids in porteins: bovine pancreatic trypsin inhibitor.
    Proc Natl Acad Sci U S A. 1975 Jun;72(6):2002-6 PMID: 1056008
  8. Allosteric interpretation of haemoglobin properties.
    Q Rev Biophys. 1975 Jul;8(3):325-420 PMID: 726
  9. Influence of globin structures on the state of the heme. Ferrous low spin derivatives.
    Biochemistry. 1976 Jan 27;15(2):378-87 PMID: 1247524
  10. Stereochemistry of low-spin iron porphyrins. II. Bis(piperidine)- , , , -tetraphenylporphinatoiron(II).
    J Am Chem Soc. 1972 Mar 22;94(6):2073-8 PMID: 4335729
  11. Analysis of the interaction of organic phosphates with hemoglobin.
    Biochemistry. 1976 Jun 29;15(13):2869-77 PMID: 7291
  12. Cooperative interactions of hemoglobin.
    Annu Rev Biochem. 1975;44:209-32 PMID: 237460
  13. Stereochemistry of cooperative effects in hemoglobin.
    Cold Spring Harb Symp Quant Biol. 1972;36:295-310 PMID: 4508142
  14. Stereochemical trigger for initiating cooperative interaction of the subunits during the oxygenation of cobaltohemoglobin.
    Proc Natl Acad Sci U S A. 1973 Dec;70(12):3919-22 PMID: 4521218
  15. Protein control of porphyrin conformation. Comparison of resonance Raman spectra of heme proteins with mesoporphyrin IX analogues.
    J Am Chem Soc. 1976 Sep 1;98(18):5482-9 PMID: 182734
  16. Optical and oxygen binding properties of spirographis, isospirographis, and 2,4-diformyl hemoglobins.
    J Biol Chem. 1974 Nov 25;249(22):7087-93 PMID: 4436299
  17. Stereochemistry of cobalt porphyrins. 3. The structure of 2,3,7,8,12,13,17,18-octaethylporphinato(1-methylimidazole)-cobalt(II). A model for deoxycoboglobin.
    J Am Chem Soc. 1974 Jul 10;96(14):4452-63 PMID: 4854396
  18. Intermediate structure of normal human haemoglobin: methaemoglobin in the deoxy quaternary conformation.
    J Mol Biol. 1973 Sep 25;79(3):495-506 PMID: 4796594
  19. Relation between structure, co-operativity and spectra in a model of hemoglobin action.
    J Mol Biol. 1973 Jun 25;77(2):207-22 PMID: 4765360
  20. A mathematical model for structure-function relations in hemoglobin.
    J Mol Biol. 1972 Dec 14;72(1):163-97 PMID: 4648112
  21. Structure-function relations in hemoglobin as determined by x-ray absorption spectroscopy.
    Proc Natl Acad Sci U S A. 1976 Feb;73(2):491-5 PMID: 1061148
  22. An infrared study of NO bonding to heme B and hemoglobin A. Evidence for inositol hexaphosphate induced cleavage of proximal histidine to iron bonds.
    Biochemistry. 1976 Jan 27;15(2):388-96 PMID: 1247525
  23. Three-dimensional fourier synthesis of human deoxyhaemoglobin at 2-5 A resolution: refinement of the atomic model.
    J Mol Biol. 1975 Sep 15;97(2):237-56 PMID: 1177322
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1977-03-00
Pages
801-5
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC430479
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com