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PMID: 25939698 Published · epublish English

Enhanced meta-analysis and replication studies identify five new psoriasis susceptibility loci.

Nature communications ·Vol. 6 ·2016-02-29

Tsoi Lam C, Spain Sarah L, Ellinghaus Eva, Stuart Philip E, Capon Francesca, Knight Jo, Tejasvi Trilokraj, Kang Hyun M, Allen Michael H, Lambert Sylviane, Stoll Stefan W, Weidinger Stephan, Gudjonsson Johann E, Koks Sulev, Kingo Külli, Esko Tonu, Das Sayantan, Metspalu Andres, Weichenthal Michael, Enerback Charlotta, Krueger Gerald G, Voorhees John J, Chandran Vinod, Rosen Cheryl F, Rahman Proton, Gladman Dafna D, Reis Andre, Nair Rajan P, Franke Andre, Barker Jonathan N W N, Abecasis Goncalo R, Trembath Richard C, Elder James T

Abstract

Psoriasis is a chronic autoimmune disease with complex genetic architecture. Previous genome-wide association studies (GWAS) and a recent meta-analysis using Immunochip data have uncovered 36 susceptibility loci. Here, we extend our previous meta-analysis of European ancestry by refined genotype calling and imputation and by the addition of 5,033 cases and 5,707 controls. The combined analysis, consisting of over 15,000 cases and 27,000 controls, identifies five new psoriasis susceptibility loci at genome-wide significance (P<5 × 10(-8)). The newly identified signals include two that reside in intergenic regions (1q31.1 and 5p13.1) and three residing near PLCL2 (3p24.3), NFKBIZ (3q12.3) and CAMK2G (10q22.2). We further demonstrate that NFKBIZ is a TRAF3IP2-dependent target of IL-17 signalling in human skin keratinocytes, thereby functionally linking two strong candidate genes. These results further integrate the genetics and immunology of psoriasis, suggesting new avenues for functional analysis and improved therapies.

MeSH 主题词
Adaptor Proteins, Signal Transducing Genetic Loci Genetic Predisposition to Disease Genome-Wide Association Study Humans I-kappa B Proteins/genetics Interleukin-17/metabolism Keratinocytes/metabolism Nuclear Proteins/genetics Psoriasis/genetics RNA, Messenger/genetics,metabolism Reproducibility of Results Tumor Necrosis Factor Receptor-Associated Peptides and Proteins/metabolism
Article Info
Journal
Nature communications
Abbr.
Nat Commun
Published
2016-02-29
Indexed
2015-05-05
Updated
2016-10-19
Language
English
Country/Region
England
NLM ID
101528555
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