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PMID: 25733868 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Comprehensive analysis of heterotrimeric G-protein complex diversity and their interactions with GPCRs in solution.

Hillenbrand M, Schori C, Schöppe J, Plückthun A

Abstract

Agonist binding to G-protein-coupled receptors (GPCRs) triggers signal transduction cascades involving heterotrimeric G proteins as key players. A major obstacle for drug design is the limited knowledge of conformational changes upon agonist binding, the details of interaction with the different G proteins, and the transmission to movements within the G protein. Although a variety of different GPCR/G protein complex structures would be needed, the transient nature of this complex and the intrinsic instability against dissociation make this endeavor very challenging. We have previously evolved GPCR mutants that display higher stability and retain their interaction with G proteins. We aimed at finding all G-protein combinations that preferentially interact with neurotensin receptor 1 (NTR1) and our stabilized mutants. We first systematically analyzed by coimmunoprecipitation the capability of 120 different G-protein combinations consisting of αi1 or αsL and all possible βγ-dimers to form a heterotrimeric complex. This analysis revealed a surprisingly unrestricted ability of the G-protein subunits to form heterotrimeric complexes, including βγ-dimers previously thought to be nonexistent, except for combinations containing β5. A second screen on coupling preference of all G-protein heterotrimers to NTR1 wild type and a stabilized mutant indicated a preference for those Gαi1βγ combinations containing γ1 and γ11. Heterotrimeric G proteins, including combinations believed to be nonexistent, were purified, and complexes with the GPCR were prepared. Our results shed new light on the combinatorial diversity of G proteins and their coupling to GPCRs and open new approaches to improve the stability of GPCR/G-protein complexes.

Keywords
G-protein–coupled receptor heterotrimeric G proteins membrane protein protein complex protein–protein interaction
MeSH Terms
Animals Chromatography, Gel Heterotrimeric GTP-Binding Proteins/isolation & purification,metabolism Humans Mutant Proteins/metabolism Protein Binding Receptors, G-Protein-Coupled/isolation & purification,metabolism Sf9 Cells Solutions
Chemicals
Mutant Proteins Receptors, G-Protein-Coupled Solutions Heterotrimeric GTP-Binding Proteins
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Hillenbrand Matthias
Department of Biochemistry, University of Zurich, 8057 Zurich, Switzerland.
Schori Christian
Department of Biochemistry, University of Zurich, 8057 Zurich, Switzerland.
Schöppe Jendrik
Department of Biochemistry, University of Zurich, 8057 Zurich, Switzerland.
Plückthun Andreas
Department of Biochemistry, University of Zurich, 8057 Zurich, Switzerland plueckthun@bioc.uzh.ch.
References (64)
64 references, click to expand
  1. Interaction between G-protein beta and gamma subunit types is selective.
    Proc Natl Acad Sci U S A. 1992 Jul 1;89(13):6220-4 PMID: 1631113
  2. The role of conformational ensembles of seven transmembrane receptors in functional selectivity.
    Curr Opin Pharmacol. 2010 Dec;10(6):775-81 PMID: 20933468
  3. G protein beta gamma subunits synthesized in Sf9 cells. Functional characterization and the significance of prenylation of gamma.
    J Biol Chem. 1992 Nov 15;267(32):23409-17 PMID: 1429682
  4. G beta association and effector interaction selectivities of the divergent G gamma subunit G gamma(13).
    J Biol Chem. 2001 Dec 28;276(52):49267-74 PMID: 11675383
  5. Robots, pipelines, polyproteins: enabling multiprotein expression in prokaryotic and eukaryotic cells.
    J Struct Biol. 2011 Aug;175(2):198-208 PMID: 21419851
  6. A family of G protein βγ subunits translocate reversibly from the plasma membrane to endomembranes on receptor activation.
    J Biol Chem. 2007 Aug 17;282(33):24099-108 PMID: 17581822
  7. G Protein betagamma dimer formation: Gbeta and Ggamma differentially determine efficiency of in vitro dimer formation.
    Biochemistry. 2005 Sep 6;44(35):11882-90 PMID: 16128590
  8. The G protein subunit gene families.
    Genomics. 1999 Dec 15;62(3):544-52 PMID: 10644457
  9. Direct molecular evolution of detergent-stable G protein-coupled receptors using polymer encapsulated cells.
    J Mol Biol. 2013 Feb 8;425(3):662-77 PMID: 23164568
  10. Identification of two forms of the gamma subunit of G protein, gamma10 and gamma11, in bovine lung and their tissue distribution in the rat.
    FEBS Lett. 1998 May 22;428(1-2):85-8 PMID: 9645481
  11. Role of molecular chaperones in G protein beta5/regulator of G protein signaling dimer assembly and G protein betagamma dimer specificity.
    J Biol Chem. 2009 Jun 12;284(24):16386-99 PMID: 19376773
  12. Protein complex expression by using multigene baculoviral vectors.
    Nat Methods. 2006 Dec;3(12):1021-32 PMID: 17117155
  13. Directed evolution of a G protein-coupled receptor for expression, stability, and binding selectivity.
    Proc Natl Acad Sci U S A. 2008 Sep 30;105(39):14808-13 PMID: 18812512
  14. Differential activity of the G protein beta5 gamma2 subunit at receptors and effectors.
    J Biol Chem. 1998 Dec 18;273(51):34429-36 PMID: 9852110
  15. Structural determinants involved in the formation and activation of G protein betagamma dimers.
    Neurosignals. 2009;17(1):82-99 PMID: 19212142
  16. Purification of recombinant G proteins from Sf9 cells by hexahistidine tagging of associated subunits. Characterization of alpha 12 and inhibition of adenylyl cyclase by alpha z.
    J Biol Chem. 1995 Jan 27;270(4):1734-41 PMID: 7829508
  17. Differential ability to form the G protein betagamma complex among members of the beta and gamma subunit families.
    J Biol Chem. 1996 Mar 22;271(12):7141-6 PMID: 8636150
  18. The receptor-bound "empty pocket" state of the heterotrimeric G-protein alpha-subunit is conformationally dynamic.
    Biochemistry. 2006 Oct 31;45(43):12986-97 PMID: 17059215
  19. Dopamine receptor-interacting protein 78 acts as a molecular chaperone for Ggamma subunits before assembly with Gbeta.
    J Biol Chem. 2007 May 4;282(18):13703-15 PMID: 17363375
  20. A brain-specific gamma subunit of G protein freed from the corresponding beta subunit under non-denaturing conditions.
    FEBS Lett. 1994 Jan 3;337(1):23-6 PMID: 8276106
  21. Identification of a discrete region of the G protein gamma subunit conferring selectivity in beta gamma complex formation.
    J Biol Chem. 1995 Apr 14;270(15):8779-84 PMID: 7721784
  22. Interactions between neurotensin receptors and G proteins.
    Peptides. 2006 Oct;27(10):2476-87 PMID: 16919370
  23. Maximizing detergent stability and functional expression of a GPCR by exhaustive recombination and evolution.
    J Mol Biol. 2012 Sep 21;422(3):414-28 PMID: 22683350
  24. Stabilizing membrane proteins through protein engineering.
    Curr Opin Chem Biol. 2013 Jun;17(3):427-35 PMID: 23639904
  25. Synthesis and assembly of G protein βγ dimers: comparison of in vitro and in vivo studies.
    Subcell Biochem. 2012;63:155-80 PMID: 23161138
  26. Specificity of G protein beta and gamma subunit interactions.
    J Biol Chem. 1992 Jul 15;267(20):13807-10 PMID: 1629181
  27. Positive selection procedure for entrapment of insertion sequence elements in gram-negative bacteria.
    J Bacteriol. 1985 Nov;164(2):918-21 PMID: 2997137
  28. Structure-function of the G protein-coupled receptor superfamily.
    Annu Rev Pharmacol Toxicol. 2013;53:531-56 PMID: 23140243
  29. Role of the prenyl group on the G protein gamma subunit in coupling trimeric G proteins to A1 adenosine receptors.
    J Biol Chem. 1996 Aug 2;271(31):18588-95 PMID: 8702509
  30. The G protein beta subunit is a determinant in the coupling of Gs to the beta 1-adrenergic and A2a adenosine receptors.
    J Biol Chem. 2001 May 11;276(19):15801-9 PMID: 11278863
  31. Diversity of G proteins in signal transduction.
    Science. 1991 May 10;252(5007):802-8 PMID: 1902986
  32. Effect of G protein heterotrimer composition on coupling of neurotransmitter receptors to N-type Ca(2+) channel modulation in sympathetic neurons.
    Proc Natl Acad Sci U S A. 2000 Jan 18;97(2):907-12 PMID: 10639178
  33. Selective regulation of N-type Ca channels by different combinations of G-protein beta/gamma subunits and RGS proteins.
    J Neurosci. 2000 Oct 1;20(19):7143-8 PMID: 11007869
  34. Purification from Sf9 cells and characterization of recombinant Gq alpha and G11 alpha. Activation of purified phospholipase C isozymes by G alpha subunits.
    J Biol Chem. 1993 Jul 5;268(19):14367-75 PMID: 8314796
  35. Insights into G protein structure, function, and regulation.
    Endocr Rev. 2003 Dec;24(6):765-81 PMID: 14671004
  36. Critical features for biosynthesis, stability, and functionality of a G protein-coupled receptor uncovered by all-versus-all mutations.
    Proc Natl Acad Sci U S A. 2012 Jun 19;109(25):9810-5 PMID: 22665811
  37. The alpha2A-adrenergic receptor discriminates between Gi heterotrimers of different betagamma subunit composition in Sf9 insect cell membranes.
    J Biol Chem. 1999 May 7;274(19):13525-33 PMID: 10224121
  38. Interaction of a G protein with an activated receptor opens the interdomain interface in the alpha subunit.
    Proc Natl Acad Sci U S A. 2011 Jun 7;108(23):9420-4 PMID: 21606326
  39. G protein beta gamma subunits.
    Annu Rev Pharmacol Toxicol. 1997;37:167-203 PMID: 9131251
  40. Structure of signaling-competent neurotensin receptor 1 obtained by directed evolution in Escherichia coli.
    Proc Natl Acad Sci U S A. 2014 Feb 11;111(6):E655-62 PMID: 24453215
  41. Gbetagamma affinity for bovine rhodopsin is determined by the carboxyl-terminal sequences of the gamma subunit.
    J Biol Chem. 2001 Dec 21;276(51):48518-25 PMID: 11602594
  42. Gbeta3 forms distinct dimers with specific Ggamma subunits and preferentially activates the beta3 isoform of phospholipase C.
    Cell Signal. 2009 May;21(5):737-44 PMID: 19168127
  43. Regions in the G protein gamma subunit important for interaction with receptors and effectors.
    Mol Pharmacol. 2006 Mar;69(3):877-87 PMID: 16319284
  44. Multiple domains of G protein beta confer subunit specificity in beta gamma interaction.
    J Biol Chem. 1994 Sep 30;269(39):24418-23 PMID: 7929103
  45. Influence of differential stability of G protein βγ dimers containing the γ11 subunit on functional activity at the M1 muscarinic receptor, A1 adenosine receptor, and phospholipase C-β.
    Biochemistry. 2006 Sep 26;45(38):11616-31 PMID: 16981721
  46. Structural diversity of G protein-coupled receptors and significance for drug discovery.
    Nat Rev Drug Discov. 2008 Apr;7(4):339-57 PMID: 18382464
  47. Structural flexibility of the G alpha s alpha-helical domain in the beta2-adrenoceptor Gs complex.
    Proc Natl Acad Sci U S A. 2011 Sep 20;108(38):16086-91 PMID: 21914848
  48. The G protein beta5 subunit interacts selectively with the Gq alpha subunit.
    J Biol Chem. 1998 Jan 2;273(1):636-44 PMID: 9417126
  49. G protein beta 5 subunit interactions with alpha subunits and effectors.
    Biochemistry. 2000 Sep 19;39(37):11340-7 PMID: 10985779
  50. Live cell analysis of G protein beta5 complex formation, function, and targeting.
    Mol Pharmacol. 2007 Oct;72(4):812-25 PMID: 17596375
  51. Role of the chaperonin CCT/TRiC complex in G protein betagamma-dimer assembly.
    J Biol Chem. 2006 Jul 21;281(29):20221-32 PMID: 16702223
  52. Visualization of G protein betagamma dimers using bimolecular fluorescence complementation demonstrates roles for both beta and gamma in subcellular targeting.
    J Biol Chem. 2004 Jul 16;279(29):30279-86 PMID: 15136579
  53. A cleavable ligand column for the rapid isolation of large quantities of homogeneous and functional neurotensin receptor 1 variants from E. coli.
    Protein Expr Purif. 2015 Apr;108:106-14 PMID: 25461958
  54. Crystal structure of a G-protein beta gamma dimer at 2.1A resolution.
    Nature. 1996 Jan 25;379(6563):369-74 PMID: 8552196
  55. Interactions of the α-subunits of heterotrimeric G-proteins with GPCRs, effectors and RGS proteins: a critical review and analysis of interacting surfaces, conformational shifts, structural diversity and electrostatic potentials.
    J Struct Biol. 2013 Jun;182(3):209-18 PMID: 23523730
  56. Crystal structure of the β2 adrenergic receptor-Gs protein complex.
    Nature. 2011 Sep 29;477(7366):549-55 PMID: 21772288
  57. Recent developments in biased agonism.
    Curr Opin Cell Biol. 2014 Apr;27:18-24 PMID: 24680426
  58. The quest to understand heterotrimeric G protein signaling.
    Nat Struct Mol Biol. 2010 Jun;17(6):650-2 PMID: 20520658
  59. A plasmid-based multigene expression system for mammalian cells.
    Nat Commun. 2010 Nov 16;1:120 PMID: 21081918
  60. Instability of the G-protein beta5 subunit in detergent.
    Anal Biochem. 1999 Mar 1;268(1):126-33 PMID: 10036171
  61. Enabling high-throughput ligation-independent cloning and protein expression for the family of ubiquitin specific proteases.
    J Struct Biol. 2011 Aug;175(2):113-9 PMID: 21453775
  62. MultiBac: expanding the research toolbox for multiprotein complexes.
    Trends Biochem Sci. 2012 Feb;37(2):49-57 PMID: 22154230
  63. Phosducin-like protein acts as a molecular chaperone for G protein betagamma dimer assembly.
    EMBO J. 2005 Jun 1;24(11):1965-75 PMID: 15889144
  64. Structural features of the G-protein/GPCR interactions.
    Biochim Biophys Acta. 2014 Jan;1840(1):16-33 PMID: 24016604
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
1091-6490
Published
2015-03-17
Epub
2015-00-02
Pages
E1181-90
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC4371982
Subset
IM
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