Home LiteratureArticle Details
PMID: 2537252 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

The Tc3 family of transposable genetic elements in Caenorhabditis elegans.

Genetics ·Vol. 121 ·No. 1 ·1989-01-00 ·Pages 47-55

Collins J, Forbes E, Anderson P

Abstract

We describe genetic and molecular properties of Tc3, a family of transposable elements in Caenorhabditis elegans. About 15 Tc3 elements are present in the genomes of several different wild-type varieties of C. elegans, but Tc3 transposition and excision are not detected in these strains. Tc3 transposition and excision occur at high frequencies, however, in strain TR679, a mutant identified because of its highly active Tc1 elements. In TR679, Tc3 is responsible for several spontaneous mutations affecting the unc-22 gene. Tc3-induced mutations are unstable, and revertants result from precise or nearly precise excision of Tc3. Although Tc3 is very active in TR679, it is not detectably active in several other mutator mutants, all of which exhibit high levels of Tc1 activity. Tc3 is 2.5 kilobases long, and except for sequences near its inverted repeat termini, it is unrelated to Tc1. The termini of Tc3 are inverted repeats of at least 70 base pairs; the terminal 8 nucleotides of Tc3 are identical to 8 of the terminal 9 nucleotides of Tc1.

MeSH Terms
Animals Base Sequence Caenorhabditis/genetics,isolation & purification Cloning, Molecular DNA Transposable Elements Escherichia coli/genetics Molecular Sequence Data Multigene Family Mutation Nucleic Acid Hybridization Restriction Mapping
Chemicals
DNA Transposable Elements
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Collins J
Department of Genetics, University of Wisconsin, Madison 53706.
Forbes E
Anderson P
References (40)
40 references, click to expand
  1. Molecular genetics of transposable elements in plants.
    Annu Rev Genet. 1986;20:175-200 PMID: 3028244
  2. Molecular analysis of the En/Spm transposable element system of Zea mays.
    EMBO J. 1986 May;5(5):835-41 PMID: 15957213
  3. The significance of responses of the genome to challenge.
    Science. 1984 Nov 16;226(4676):792-801 PMID: 15739260
  4. Insertion and excision of Caenorhabditis elegans transposable element Tc1.
    Mol Cell Biol. 1988 Feb;8(2):737-46 PMID: 2832734
  5. Lambda replacement vectors carrying polylinker sequences.
    J Mol Biol. 1983 Nov 15;170(4):827-42 PMID: 6315951
  6. Transposable elements in prokaryotes.
    Annu Rev Genet. 1981;15:341-404 PMID: 6279020
  7. sigma, a repetitive element found adjacent to tRNA genes of yeast.
    Proc Natl Acad Sci U S A. 1982 Jul;79(13):4138-42 PMID: 6287468
  8. Genetic Organization in CAENORHABDITIS ELEGANS: Fine-Structure Analysis of the unc-22 Gene.
    Genetics. 1979 Jan;91(1):95-103 PMID: 17248882
  9. Tissue specificity of Drosophila P element transposition is regulated at the level of mRNA splicing.
    Cell. 1986 Jan 17;44(1):7-19 PMID: 3000622
  10. cA lectin gene insertion has the structural features of a transposable element.
    Cell. 1983 Oct;34(3):1023-31 PMID: 6313203
  11. Haemophilia A resulting from de novo insertion of L1 sequences represents a novel mechanism for mutation in man.
    Nature. 1988 Mar 10;332(6160):164-6 PMID: 2831458
  12. The genetics of Caenorhabditis elegans.
    Genetics. 1974 May;77(1):71-94 PMID: 4366476
  13. High-frequency excision of transposable element Tc 1 in the nematode Caenorhabditis elegans is limited to somatic cells.
    Cell. 1984 Mar;36(3):599-605 PMID: 6321037
  14. Activation of a transposable element in the germ line but not the soma of Caenorhabditis elegans.
    Nature. 1987 Aug 20-26;328(6132):726-8 PMID: 3039378
  15. Transposable elements generate novel spatial patterns of gene expression in Antirrhinum majus.
    Cell. 1986 Oct 24;47(2):285-96 PMID: 3021338
  16. A trans-acting product needed for P factor transposition in Drosophila.
    Science. 1984 Dec 7;226(4679):1194-6 PMID: 6095450
  17. The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers.
    Gene. 1982 Oct;19(3):259-68 PMID: 6295879
  18. The P family of transposable elements in Drosophila.
    Annu Rev Genet. 1983;17:315-44 PMID: 6320712
  19. The 17-kb Tam1 element of Antirrhinum majus induces a 3-bp duplication upon integration into the chalcone synthase gene.
    EMBO J. 1984 May;3(5):1015-9 PMID: 16453519
  20. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  21. Spontaneous unstable unc-22 IV mutations in C. elegans var. Bergerac.
    Genetics. 1984 Dec;108(4):859-77 PMID: 6096205
  22. lin-12, a nematode homeotic gene, is homologous to a set of mammalian proteins that includes epidermal growth factor.
    Cell. 1985 Dec;43(3 Pt 2):583-90 PMID: 3000611
  23. The 1723 element: a long, homogeneous, highly repeated DNA unit interspersed in the genome of Xenopus laevis.
    J Mol Biol. 1983 Nov 5;170(3):583-96 PMID: 6313946
  24. Nonviral retroposons: genes, pseudogenes, and transposable elements generated by the reverse flow of genetic information.
    Annu Rev Biochem. 1986;55:631-61 PMID: 2427017
  25. Controlling element-induced alterations in UDPglucose:flavonoid glucosyltransferase, the enzyme specified by the bronze locus in maize.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5623-7 PMID: 16592474
  26. Mutants with altered muscle structure of Caenorhabditis elegans.
    Dev Biol. 1980 Jun 15;77(2):271-302 PMID: 7190524
  27. Molecular cloning of the muscle gene unc-22 in Caenorhabditis elegans by Tc1 transposon tagging.
    Proc Natl Acad Sci U S A. 1986 Apr;83(8):2579-83 PMID: 3010313
  28. Transposable element Tc1 of Caenorhabditis elegans recognizes specific target sequences for integration.
    Proc Natl Acad Sci U S A. 1988 Feb;85(3):861-4 PMID: 2829205
  29. A stable genomic source of P element transposase in Drosophila melanogaster.
    Genetics. 1988 Mar;118(3):461-70 PMID: 2835286
  30. Distinct characteristics of loop sequences of two Drosophila foldback transposable elements.
    Nucleic Acids Res. 1985 Jan 25;13(2):485-500 PMID: 2987798
  31. The nucleotide sequence of the maize controlling element Activator.
    Cell. 1984 Jun;37(2):635-43 PMID: 6327080
  32. The structure of hobo transposable elements and their insertion sites.
    EMBO J. 1986 Dec 20;5(13):3615-23 PMID: 16453744
  33. A transposable element inserted just 5' to a Drosophila glue protein gene alters gene expression and chromatin structure.
    Cell. 1983 Aug;34(1):75-84 PMID: 6309414
  34. Analysis of a transposable element in Caenorhabditis elegans.
    Proc Natl Acad Sci U S A. 1983 Jun;80(12):3585-9 PMID: 6304721
  35. Structures of P transposable elements and their sites of insertion and excision in the Drosophila melanogaster genome.
    Cell. 1983 Aug;34(1):25-35 PMID: 6309410
  36. Hybrid dysgenesis-induced revertants of insertions at the 5' end of the rudimentary gene in Drosophila melanogaster: transposon-induced control mutations.
    Genetics. 1986 Sep;114(1):165-82 PMID: 3021567
  37. Nucleotide sequence of the maize transposable element Mul.
    Nucleic Acids Res. 1984 Aug 10;12(15):5955-67 PMID: 6089104
  38. Tx1: a transposable element from Xenopus laevis with some unusual properties.
    Mol Cell Biol. 1986 Mar;6(3):933-41 PMID: 3022140
  39. Dictyostelium transposable element DIRS-1 has 350-base-pair inverted terminal repeats that contain a heat shock promoter.
    Proc Natl Acad Sci U S A. 1984 May;81(9):2660-4 PMID: 6326136
  40. Mating signals control expression of mutations resulting from insertion of a transposable repetitive element adjacent to diverse yeast genes.
    Cell. 1980 Nov;22(2 Pt 2):427-36 PMID: 6256080
Article Info
Journal
Genetics
Abbr.
Genetics
ISSN
0016-6731
Published
1989-01-00
Pages
47-55
Language
English
Region
United States
NLM ID
0374636
PMCID
PMC1203604
Subset
IM
Grants
NIGMS NIH HHS · GM30132 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com