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PMID: 24627050 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Review

FTO and obesity: mechanisms of association.

Current diabetes reports ·Vol. 14 ·No. 5 ·2014-00-00 ·Pages 486

Zhao X, Yang Y, Sun BF, Zhao YL, Yang YG

Abstract

The Fat mass and obesity associated (FTO) gene is a newly identified genetic factor for obesity. However, the exact molecular mechanisms responsible for the effect of FTO on obesity remain largely unknown. Recent studies from genome-wide associated studies reveal that genetic variants in the FTO gene are associated not only with human adiposity and metabolic disorders, but also with cancer, a highly obesity-associated disease as well. Data from animal and cellular models further demonstrate that the perturbation of FTO enzymatic activity dysregulates genes related to energy metabolism, causing the malfunction of energy and adipose tissue homeostasis in mice. The most significant advance about FTO research is the recent discovery of FTO as the first N6-methyl-adenosine (m(6)A) RNA demethylase that catalyzes the m(6)A demethylation in α-ketoglutarate - and Fe(2+)-dependent manners. This finding provides the strong evidence that the dynamic and reversible chemical m(6)A modification on RNA may act as a novel epitranscriptomic marker. Furthermore, the FTO protein was observed to be partially localized onto nuclear speckles enriching mRNA processing factors, implying a potential role of FTO in regulating RNA processing. This review summarizes the recent progress about biological functions of FTO through disease-association studies as well as the data from in vitro and in vivo models, and highlights the biochemical features of FTO that might be linked to obesity.

MeSH Terms
Adipose Tissue Alpha-Ketoglutarate-Dependent Dioxygenase FTO Animals Epigenesis, Genetic Female Genetic Variation Genome-Wide Association Study Humans Male Metabolic Diseases/genetics,physiopathology Mice Mixed Function Oxygenases/genetics Neoplasms/genetics,physiopathology Obesity/genetics,physiopathology Oxo-Acid-Lyases/genetics Polymorphism, Single Nucleotide Proteins/genetics RNA, Messenger
Chemicals
Proteins RNA, Messenger Mixed Function Oxygenases FTO protein, mouse Alpha-Ketoglutarate-Dependent Dioxygenase FTO FTO protein, human Oxo-Acid-Lyases
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Zhao Xu
Laboratory of Genome Variations and Precision Biomedicine, Beijing Institute of Genomics, Chinese Academy of Sciences, No. 1-7 Beichen West Road, Chaoyang District, Beijing, 100101, China.
Yang Ying
Sun Bao-Fa
Zhao Yong-Liang
Yang Yun-Gui
References (94)
94 references, click to expand
  1. The methylated constituents of L cell messenger RNA: evidence for an unusual cluster at the 5' terminus.
    Cell. 1975 Apr;4(4):387-94 PMID: 1168101
  2. Variants in the fat mass- and obesity-associated (FTO) gene are not associated with obesity in a Chinese Han population.
    Diabetes. 2008 Jan;57(1):264-8 PMID: 17959933
  3. Association of obesity-related genetic variants with endometrial cancer risk: a report from the Shanghai Endometrial Cancer Genetics Study.
    Am J Epidemiol. 2011 Nov 15;174(10):1115-26 PMID: 21976109
  4. Nucleic acid modifications with epigenetic significance.
    Curr Opin Chem Biol. 2012 Dec;16(5-6):516-24 PMID: 23092881
  5. Gene expression of FTO in human subcutaneous adipose tissue, peripheral blood mononuclear cells and adipocyte cell line.
    J Nutrigenet Nutrigenomics. 2010;3(1):37-45 PMID: 20948226
  6. Purification and cDNA cloning of the AdoMet-binding subunit of the human mRNA (N6-adenosine)-methyltransferase.
    RNA. 1997 Nov;3(11):1233-47 PMID: 9409616
  7. Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq.
    Nature. 2012 Apr 29;485(7397):201-6 PMID: 22575960
  8. Genetics and epigenetics of obesity.
    Maturitas. 2011 May;69(1):41-9 PMID: 21466928
  9. Role for the obesity-related FTO gene in the cellular sensing of amino acids.
    Proc Natl Acad Sci U S A. 2013 Feb 12;110(7):2557-62 PMID: 23359686
  10. Relationship between blood glucose levels and hepatic Fto mRNA expression in mice.
    Biochem Biophys Res Commun. 2010 Oct 1;400(4):713-7 PMID: 20816934
  11. The fat mass- and obesity-associated locus and dietary intake in children.
    Am J Clin Nutr. 2008 Oct;88(4):971-8 PMID: 18842783
  12. N6-methyl-adenosine modification in messenger and long non-coding RNA.
    Trends Biochem Sci. 2013 Apr;38(4):204-9 PMID: 23337769
  13. Genome wide association (GWA) study for early onset extreme obesity supports the role of fat mass and obesity associated gene (FTO) variants.
    PLoS One. 2007 Dec 26;2(12):e1361 PMID: 18159244
  14. Genome-wide association scan shows genetic variants in the FTO gene are associated with obesity-related traits.
    PLoS Genet. 2007 Jul;3(7):e115 PMID: 17658951
  15. Epigenetics in human disease and prospects for epigenetic therapy.
    Nature. 2004 May 27;429(6990):457-63 PMID: 15164071
  16. An obesity-associated FTO gene variant and increased energy intake in children.
    N Engl J Med. 2008 Dec 11;359(24):2558-66 PMID: 19073975
  17. Obesity susceptibility genetic variants identified from recent genome-wide association studies: implications in a chinese population.
    J Clin Endocrinol Metab. 2010 Mar;95(3):1395-403 PMID: 20061430
  18. Association between the FTO rs9939609 polymorphism and leptin in European adolescents: a possible link with energy balance control. The HELENA study.
    Int J Obes (Lond). 2011 Jan;35(1):66-71 PMID: 20975729
  19. A common variant in the FTO gene is associated with body mass index and predisposes to childhood and adult obesity.
    Science. 2007 May 11;316(5826):889-94 PMID: 17434869
  20. Oxidative demethylation of 3-methylthymine and 3-methyluracil in single-stranded DNA and RNA by mouse and human FTO.
    FEBS Lett. 2008 Oct 15;582(23-24):3313-9 PMID: 18775698
  21. Functional coupling analysis suggests link between the obesity gene FTO and the BDNF-NTRK2 signaling pathway.
    BMC Neurosci. 2011 Nov 16;12:117 PMID: 22087873
  22. Impact of FTO genotypes on BMI and weight in polycystic ovary syndrome: a systematic review and meta-analysis.
    Diabetologia. 2012 Oct;55(10):2636-2645 PMID: 22801903
  23. The biology of FTO: from nucleic acid demethylase to amino acid sensor.
    Diabetologia. 2013 Oct;56(10):2113-21 PMID: 23896822
  24. A genome-wide association study of type 2 diabetes in Finns detects multiple susceptibility variants.
    Science. 2007 Jun 1;316(5829):1341-5 PMID: 17463248
  25. FTO deficiency induces UCP-1 expression and mitochondrial uncoupling in adipocytes.
    Endocrinology. 2013 Sep;154(9):3141-51 PMID: 23751871
  26. The fat mass and obesity associated gene (Fto) regulates activity of the dopaminergic midbrain circuitry.
    Nat Neurosci. 2013 Aug;16(8):1042-8 PMID: 23817550
  27. Inverse relationship between obesity and FTO gene expression in visceral adipose tissue in humans.
    Diabetologia. 2008 Apr;51(4):641-7 PMID: 18251005
  28. FTO polymorphisms are associated with adult body mass index (BMI) and colorectal adenomas in African-Americans.
    Carcinogenesis. 2011 May;32(5):748-56 PMID: 21317302
  29. The common rs9939609 gene variant of the fat mass- and obesity-associated gene FTO is related to fat cell lipolysis.
    J Lipid Res. 2008 Mar;49(3):607-11 PMID: 18048838
  30. Enhanced 5-methylcytosine detection in single-molecule, real-time sequencing via Tet1 oxidation.
    BMC Biol. 2013 Jan 22;11:4 PMID: 23339471
  31. N6-methyl-adenosine (m6A) in RNA: an old modification with a novel epigenetic function.
    Genomics Proteomics Bioinformatics. 2013 Feb;11(1):8-17 PMID: 23453015
  32. Sprouts of RNA epigenetics: the discovery of mammalian RNA demethylases.
    RNA Biol. 2013 Jun;10(6):915-8 PMID: 23619745
  33. Association between FTO gene polymorphism and cancer risk: evidence from 16,277 cases and 31,153 controls.
    Tumour Biol. 2012 Aug;33(4):1237-43 PMID: 22396042
  34. Variation in the FTO gene influences food intake but not energy expenditure.
    Exp Clin Endocrinol Diabetes. 2009 Apr;117(4):194-7 PMID: 19053021
  35. FTO: the first gene contributing to common forms of human obesity.
    Obes Rev. 2008 May;9(3):246-50 PMID: 18373508
  36. The obesity related gene, FTO, interacts with APOE, and is associated with Alzheimer's disease risk: a prospective cohort study.
    J Alzheimers Dis. 2011;23(3):461-9 PMID: 21098976
  37. Subcutaneous and visceral adipose tissue FTO gene expression and adiposity, insulin action, glucose metabolism, and inflammatory adipokines in type 2 diabetes mellitus and in health.
    Obes Surg. 2010 Jan;20(1):108-13 PMID: 19763711
  38. The rs9939609 gene variant in FTO modified the metabolic response of weight loss after a 3-month intervention with a hypocaloric diet.
    J Investig Med. 2013 Jan;61(1):22-6 PMID: 23138007
  39. Epigenetic modifications and human disease.
    Nat Biotechnol. 2010 Oct;28(10):1057-68 PMID: 20944598
  40. Development of cell-active N6-methyladenosine RNA demethylase FTO inhibitor.
    J Am Chem Soc. 2012 Oct 31;134(43):17963-71 PMID: 23045983
  41. FTO effect on energy demand versus food intake.
    Nature. 2010 Apr 1;464(7289):E1; discussion E2 PMID: 20360686
  42. Adult onset global loss of the fto gene alters body composition and metabolism in the mouse.
    PLoS Genet. 2013;9(1):e1003166 PMID: 23300482
  43. Obesity-related genetic variants, human pigmentation, and risk of melanoma.
    Hum Genet. 2013 Jul;132(7):793-801 PMID: 23539184
  44. Polymorphisms of the FTO gene are associated with variation in energy intake, but not energy expenditure.
    Obesity (Silver Spring). 2008 Aug;16(8):1961-5 PMID: 18551109
  45. Association study of type 2 diabetes genetic susceptibility variants and risk of pancreatic cancer: an analysis of PanScan-I data.
    Cancer Causes Control. 2011 Jun;22(6):877-83 PMID: 21445555
  46. The obesity-associated FTO gene encodes a 2-oxoglutarate-dependent nucleic acid demethylase.
    Science. 2007 Nov 30;318(5855):1469-72 PMID: 17991826
  47. Analysis of RNA base modification and structural rearrangement by single-molecule real-time detection of reverse transcription.
    J Nanobiotechnology. 2013 Apr 03;11:8 PMID: 23552456
  48. Brain dopamine and obesity.
    Lancet. 2001 Feb 3;357(9253):354-7 PMID: 11210998
  49. Mammalian WTAP is a regulatory subunit of the RNA N6-methyladenosine methyltransferase.
    Cell Res. 2014 Feb;24(2):177-89 PMID: 24407421
  50. Body mass index and obesity- and diabetes-associated genotypes and risk for pancreatic cancer.
    Cancer Epidemiol Biomarkers Prev. 2011 May;20(5):779-92 PMID: 21357378
  51. Fasting induced cytoplasmic Fto expression in some neurons of rat hypothalamus.
    PLoS One. 2013 May 06;8(5):e63694 PMID: 23671692
  52. Regulation of FTO and FTM expression during human preadipocyte differentiation.
    Horm Metab Res. 2011 Jan;43(1):17-21 PMID: 20865646
  53. FTO levels affect RNA modification and the transcriptome.
    Eur J Hum Genet. 2013 Mar;21(3):317-23 PMID: 22872099
  54. FTO-mediated formation of N6-hydroxymethyladenosine and N6-formyladenosine in mammalian RNA.
    Nat Commun. 2013;4:1798 PMID: 23653210
  55. The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
    Mol Cell. 2012 Jun 8;46(5):674-90 PMID: 22681889
  56. Regulation and function of FTO mRNA expression in human skeletal muscle and subcutaneous adipose tissue.
    Diabetes. 2009 Oct;58(10):2402-8 PMID: 19587359
  57. Inactivation of the Fto gene protects from obesity.
    Nature. 2009 Apr 16;458(7240):894-8 PMID: 19234441
  58. A METTL3-METTL14 complex mediates mammalian nuclear RNA N6-adenosine methylation.
    Nat Chem Biol. 2014 Feb;10(2):93-5 PMID: 24316715
  59. The human obesity gene map: the 2005 update.
    Obesity (Silver Spring). 2006 Apr;14(4):529-644 PMID: 16741264
  60. Hypothalamic-specific manipulation of Fto, the ortholog of the human obesity gene FTO, affects food intake in rats.
    PLoS One. 2010 Jan 19;5(1):e8771 PMID: 20098739
  61. The birth of the Epitranscriptome: deciphering the function of RNA modifications.
    Genome Biol. 2012 Oct 31;13(10):175 PMID: 23113984
  62. Crystal structure of the FTO protein reveals basis for its substrate specificity.
    Nature. 2010 Apr 22;464(7292):1205-9 PMID: 20376003
  63. A commonly carried allele of the obesity-related FTO gene is associated with reduced brain volume in the healthy elderly.
    Proc Natl Acad Sci U S A. 2010 May 4;107(18):8404-9 PMID: 20404173
  64. A mouse model for the metabolic effects of the human fat mass and obesity associated FTO gene.
    PLoS Genet. 2009 Aug;5(8):e1000599 PMID: 19680540
  65. N6-methyladenosine in nuclear RNA is a major substrate of the obesity-associated FTO.
    Nat Chem Biol. 2011 Oct 16;7(12):885-7 PMID: 22002720
  66. Reversible RNA adenosine methylation in biological regulation.
    Trends Genet. 2013 Feb;29(2):108-15 PMID: 23218460
  67. Overexpression of Fto leads to increased food intake and results in obesity.
    Nat Genet. 2010 Dec;42(12):1086-92 PMID: 21076408
  68. Diabetes genes and prostate cancer in the Atherosclerosis Risk in Communities study.
    Cancer Epidemiol Biomarkers Prev. 2010 Feb;19(2):558-65 PMID: 20142250
  69. The fat mass and obesity associated gene FTO functions in the brain to regulate postnatal growth in mice.
    PLoS One. 2010 Nov 16;5(11):e14005 PMID: 21103374
  70. Methylated nucleotides block 5' terminus of HeLa cell messenger RNA.
    Cell. 1975 Apr;4(4):379-86 PMID: 164293
  71. ALKBH5 is a mammalian RNA demethylase that impacts RNA metabolism and mouse fertility.
    Mol Cell. 2013 Jan 10;49(1):18-29 PMID: 23177736
  72. Sensitive and specific single-molecule sequencing of 5-hydroxymethylcytosine.
    Nat Methods. 2011 Nov 20;9(1):75-7 PMID: 22101853
  73. Variation in FTO contributes to childhood obesity and severe adult obesity.
    Nat Genet. 2007 Jun;39(6):724-6 PMID: 17496892
  74. Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons.
    Cell. 2012 Jun 22;149(7):1635-46 PMID: 22608085
  75. FTO is expressed in neurones throughout the brain and its expression is unaltered by fasting.
    PLoS One. 2011;6(11):e27968 PMID: 22140494
  76. A variant in FTO shows association with melanoma risk not due to BMI.
    Nat Genet. 2013 Apr;45(4):428-32, 432e1 PMID: 23455637
  77. Common variant rs9939609 in gene FTO confers risk to polycystic ovary syndrome.
    PLoS One. 2013 Jul 01;8(7):e66250 PMID: 23840863
  78. Common variation in the fat mass and obesity-associated (FTO) gene confers risk of obesity and modulates BMI in the Chinese population.
    Diabetes. 2008 Aug;57(8):2245-52 PMID: 18487448
  79. Obesity and cancer: Mendelian randomization approach utilizing the FTO genotype.
    Int J Epidemiol. 2009 Aug;38(4):971-5 PMID: 19542184
  80. Dopamine D2 receptors in addiction-like reward dysfunction and compulsive eating in obese rats.
    Nat Neurosci. 2010 May;13(5):635-41 PMID: 20348917
  81. The obesity-associated Fto gene is a transcriptional coactivator.
    Biochem Biophys Res Commun. 2010 Oct 22;401(3):390-5 PMID: 20858458
  82. The WHO report "Preventing chronic diseases: a vital investment" and us.
    Soz Praventivmed. 2006;51(2):74 PMID: 18027782
  83. T-HOD: a literature-based candidate gene database for hypertension, obesity and diabetes.
    Database (Oxford). 2013 Feb 12;2013:bas061 PMID: 23406793
  84. Type 2 diabetes susceptibility gene expression in normal or diabetic sorted human alpha and beta cells: correlations with age or BMI of islet donors.
    PLoS One. 2010 Jun 10;5(6):e11053 PMID: 20548773
  85. Characterization of Novikoff hepatoma mRNA methylation and heterogeneity in the methylated 5' terminus.
    Biochemistry. 1975 Oct 7;14(20):4367-74 PMID: 169893
  86. The role of the fat mass and obesity associated gene (FTO) in breast cancer risk.
    BMC Med Genet. 2011 Apr 13;12:52 PMID: 21489227
  87. Associations between an obesity related genetic variant (FTO rs9939609) and prostate cancer risk.
    PLoS One. 2010 Oct 19;5(10):e13485 PMID: 20976066
  88. The obesity-associated polymorphisms FTO rs9939609 and MC4R rs17782313 and endometrial cancer risk in non-Hispanic white women.
    PLoS One. 2011 Feb 08;6(2):e16756 PMID: 21347432
  89. FTO expression is regulated by availability of essential amino acids.
    Int J Obes (Lond). 2013 May;37(5):744-7 PMID: 22614055
  90. The obesity gene and colorectal cancer risk: a population study in Northern Italy.
    Eur J Intern Med. 2012 Jan;23(1):65-9 PMID: 22153534
  91. Involvement of leptin receptor long isoform (LepRb)-STAT3 signaling pathway in brain fat mass- and obesity-associated (FTO) downregulation during energy restriction.
    Mol Med. 2011 May-Jun;17(5-6):523-32 PMID: 21267512
  92. The FTO gene and measured food intake in children.
    Int J Obes (Lond). 2009 Jan;33(1):42-5 PMID: 18838977
  93. FTO genotype is associated with phenotypic variability of body mass index.
    Nature. 2012 Oct 11;490(7419):267-72 PMID: 22982992
  94. Replication of genome-wide association signals in UK samples reveals risk loci for type 2 diabetes.
    Science. 2007 Jun 1;316(5829):1336-41 PMID: 17463249
Article Info
Journal
Current diabetes reports
Abbr.
Curr Diab Rep
ISSN
1539-0829
Published
2014-00-00
Pages
486
Language
English
Region
United States
NLM ID
101093791
Subset
IM
Analysis Services
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