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PMID: 24301061 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

GWAS Central: a comprehensive resource for the comparison and interrogation of genome-wide association studies.

European journal of human genetics : EJHG ·Vol. 22 ·No. 7 ·2014-07-00 ·Pages 949-52

Beck T, Hastings RK, Gollapudi S, Free RC, Brookes AJ

Abstract

To facilitate broad and convenient integrative visualization of and access to GWAS data, we have created the GWAS Central resource (http://www.gwascentral.org). This database seeks to provide a comprehensive collection of summary-level genetic association data, structured both for maximal utility and for safe open access (i.e., non-directional signals to fully preclude research subject identification). The resource emphasizes on advanced tools that allow comparison and discovery of relevant data sets from the perspective of genes, genome regions, phenotypes or traits. Tested markers and relevant genomic features can be visually interrogated across up to 16 multiple association data sets in a single view, starting at a chromosome-wide view and increasing in resolution down to individual bases. In addition, users can privately upload and view their own data as temporary files. Search and display utility is further enhanced by exploiting phenotype ontology annotations to allow genetic variants associated with phenotypes and traits of interest to be precisely identified, across all studies. Data submissions are accepted from individual researchers, groups and consortia, whereas we also actively gather data sets from various public sources. As a result, the resource now provides over 67 million P-values for over 1600 studies, making it the world's largest openly accessible online collection of summary-level GWAS association information.

MeSH Terms
Databases, Genetic Female Genome, Human Genome-Wide Association Study Humans Internet Male Quantitative Trait, Heritable
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Beck Tim
Department of Genetics, University of Leicester, Leicester, UK.
Hastings Robert K
Department of Genetics, University of Leicester, Leicester, UK.
Gollapudi Sirisha
Department of Genetics, University of Leicester, Leicester, UK.
Free Robert C
Department of Genetics, University of Leicester, Leicester, UK.
Brookes Anthony J
Department of Genetics, University of Leicester, Leicester, UK.
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Article Info
Journal
European journal of human genetics : EJHG
Abbr.
Eur J Hum Genet
ISSN
1476-5438
Published
2014-07-00
Epub
2013-00-04
Pages
949-52
Language
English
Region
England
NLM ID
9302235
PMCID
PMC4060122
Subset
IM
Analysis Services
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