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PMID: 24174536 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

GeneProf data: a resource of curated, integrated and reusable high-throughput genomics experiments.

Nucleic acids research ·Vol. 42 ·No. Database issue ·2014-01-00 ·Pages D851-8

Halbritter F, Kousa AI, Tomlinson SR

Abstract

GeneProf Data (http://www.geneprof.org) is an open web resource for analysed functional genomics experiments. We have built up a large collection of completely processed RNA-seq and ChIP-seq studies by carefully and transparently reanalysing and annotating high-profile public data sets. GeneProf makes these data instantly accessible in an easily interpretable, searchable and reusable manner and thus opens up the path to the advantages and insights gained from genome-scale experiments to a broader scientific audience. Moreover, GeneProf supports programmatic access to these data via web services to further facilitate the reuse of experimental data across tools and laboratories.

MeSH Terms
Animals Binding Sites Databases, Genetic Gene Expression Profiling Genomics High-Throughput Nucleotide Sequencing Humans Internet Mice Sequence Analysis, RNA Systems Integration Transcription Factors/metabolism
Chemicals
Transcription Factors
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Halbritter Florian
Institute for Stem Cell Research, Centre for Regenerative Medicine, School of Biological Sciences, University of Edinburgh, SCRM Building, 5 Little France Drive, Edinburgh EH16 4UU, UK.
Kousa Anastasia I
Tomlinson Simon R
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Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
1362-4962
Published
2014-01-00
Epub
2013-00-29
Pages
D851-8
Language
English
Region
England
NLM ID
0411011
PMCID
PMC3965072
Subset
IM
Grants
Medical Research Council · G0901533 · United Kingdom
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