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PMID: 24145452 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Protein kinase and ribonuclease domains of IRE1 confer stress tolerance, vegetative growth, and reproductive development in Arabidopsis.

Deng Y, Srivastava R, Howell SH

Abstract

The unfolded protein response (UPR) endows plants with the capacity to perceive, respond, and protect themselves from adverse environmental conditions. The UPR signaling pathway in Arabidopsis has two "arms," one arm involving the bifunctional protein kinase (PK)/ribonuclease, IRE1, a RNA splicing enzyme, and another involving membrane-associated transcription factors, such as basic leucine zipper transcription factor 28 (bZIP28). Because of functional redundancies, single gene mutations in the plant UPR signaling pathway generally have not resulted in prominent phenotypes. In this study we generated multiple mutations in the UPR signaling pathway, such as an ire1a ire1b double mutant, which showed defects in stress tolerance and vegetative growth and development. Complementation of ire1a ire1b with constructs containing site-specific mutations in the PK or RNase domains of IRE1b demonstrated that a functional RNase domain is required for endoplasmic reticulum stress tolerance, and that both the PK and RNase domains are required for normal vegetative growth under unstressed conditions. Root growth under stress conditions was dependent on the splicing target of IRE1b, bZIP60 mRNA, and on regulated IRE1-dependent decay of target genes. However, root and shoot growth in the absence of stress was independent of bZIP60. Blocking both arms of the UPR signaling pathway in a triple ire1a ire1b bzip28 mutant was lethal, impacting pollen viability under unstressed conditions. Complementation with IRE1b constructs showed that both the PK and RNase domains are required for normal gametophyte development, but bZIP60 is not. Hence, the UPR plays a critical role in stress tolerance, and in normal vegetative growth and reproductive development in plants.

MeSH Terms
Arabidopsis/enzymology,growth & development Arabidopsis Proteins/metabolism DNA Primers/genetics Gene Expression Profiling Gene Expression Regulation, Plant/physiology Phosphorylation Plant Roots/growth & development Pollen/growth & development Protein Kinases/metabolism Reproduction/physiology Reverse Transcriptase Polymerase Chain Reaction Ribonucleases/metabolism Signal Transduction/physiology Stress, Physiological/physiology Unfolded Protein Response/physiology
Chemicals
Arabidopsis Proteins DNA Primers Protein Kinases Ire1-1 protein, Arabidopsis Ribonucleases
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Deng Yan
Plant Sciences Institute and the Department of Genetics, Development and Cell Biology, Iowa State University, Ames, IA 50011.
Srivastava Renu
Howell Stephen H
References (19)
19 references, click to expand
  1. Attenuation of yeast UPR is essential for survival and is mediated by IRE1 kinase.
    J Cell Biol. 2011 Apr 4;193(1):41-50 PMID: 21444691
  2. Endoplasmic reticulum stress responses in plants.
    Annu Rev Plant Biol. 2013;64:477-99 PMID: 23330794
  3. Defects in IRE1 enhance cell death and fail to degrade mRNAs encoding secretory pathway proteins in the Arabidopsis unfolded protein response.
    Proc Natl Acad Sci U S A. 2013 Apr 2;110(14):5713-8 PMID: 23509268
  4. Structural and functional basis for RNA cleavage by Ire1.
    BMC Biol. 2011 Jul 06;9:47 PMID: 21729333
  5. Molecular characterization of two Arabidopsis Ire1 homologs, endoplasmic reticulum-located transmembrane protein kinases.
    Plant Physiol. 2001 Nov;127(3):949-62 PMID: 11706177
  6. Homeostatic adaptation to endoplasmic reticulum stress depends on Ire1 kinase activity.
    J Cell Biol. 2011 Apr 4;193(1):171-84 PMID: 21444684
  7. Oligomerization and phosphorylation of the Ire1p kinase during intracellular signaling from the endoplasmic reticulum to the nucleus.
    EMBO J. 1996 Jun 17;15(12):3028-39 PMID: 8670804
  8. Mammalian endoplasmic reticulum stress sensor IRE1 signals by dynamic clustering.
    Proc Natl Acad Sci U S A. 2010 Sep 14;107(37):16113-8 PMID: 20798350
  9. Degradation of the endoplasmic reticulum by autophagy during endoplasmic reticulum stress in Arabidopsis.
    Plant Cell. 2012 Nov;24(11):4635-51 PMID: 23175745
  10. The unfolded protein response: from stress pathway to homeostatic regulation.
    Science. 2011 Nov 25;334(6059):1081-6 PMID: 22116877
  11. Arabidopsis bZIP60 is a proteolysis-activated transcription factor involved in the endoplasmic reticulum stress response.
    Plant Cell. 2008 Nov;20(11):3107-21 PMID: 19017746
  12. Heat induces the splicing by IRE1 of a mRNA encoding a transcription factor involved in the unfolded protein response in Arabidopsis.
    Proc Natl Acad Sci U S A. 2011 Apr 26;108(17):7247-52 PMID: 21482766
  13. Arabidopsis IRE1 catalyses unconventional splicing of bZIP60 mRNA to produce the active transcription factor.
    Sci Rep. 2011;1:29 PMID: 22355548
  14. Regulated Ire1-dependent decay of messenger RNAs in mammalian cells.
    J Cell Biol. 2009 Aug 10;186(3):323-31 PMID: 19651891
  15. bZIP28 and NF-Y transcription factors are activated by ER stress and assemble into a transcriptional complex to regulate stress response genes in Arabidopsis.
    Plant Cell. 2010 Mar;22(3):782-96 PMID: 20207753
  16. IRE1alpha kinase activation modes control alternate endoribonuclease outputs to determine divergent cell fates.
    Cell. 2009 Aug 7;138(3):562-75 PMID: 19665977
  17. Decay of endoplasmic reticulum-localized mRNAs during the unfolded protein response.
    Science. 2006 Jul 7;313(5783):104-7 PMID: 16825573
  18. VANGUARD1 encodes a pectin methylesterase that enhances pollen tube growth in the Arabidopsis style and transmitting tract.
    Plant Cell. 2005 Feb;17(2):584-96 PMID: 15659637
  19. Genomic analysis of the unfolded protein response in Arabidopsis shows its connection to important cellular processes.
    Plant Cell. 2003 Feb;15(2):561-76 PMID: 12566592
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
1091-6490
Published
2013-11-26
Epub
2013-00-21
Pages
19633-8
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC3845099
Subset
IM
Corrections
CommentIn
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