-
The CCP4 suite: programs for protein crystallography.
Acta Crystallogr D Biol Crystallogr. 1994 Sep 1;50(Pt 5):760-3
PMID: 15299374
-
Overview of the CCP4 suite and current developments.
Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):235-42
PMID: 21460441
-
What makes an aquaporin a glycerol channel? A comparative study of AqpZ and GlpF.
Structure. 2005 Aug;13(8):1107-18
PMID: 16084383
-
From structure to disease: the evolving tale of aquaporin biology.
Nat Rev Mol Cell Biol. 2004 Sep;5(9):687-98
PMID: 15340377
-
Control of the selectivity of the aquaporin water channel family by global orientational tuning.
Science. 2002 Apr 19;296(5567):525-30
PMID: 11964478
-
Point mutations in the aromatic/arginine region in aquaporin 1 allow passage of urea, glycerol, ammonia, and protons.
Proc Natl Acad Sci U S A. 2006 Jan 10;103(2):269-74
PMID: 16407156
-
Proton transfer 200 years after von Grotthuss: insights from ab initio simulations.
Chemphyschem. 2006 Sep 11;7(9):1848-70
PMID: 16929553
-
Coot: model-building tools for molecular graphics.
Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 1):2126-32
PMID: 15572765
-
The channel architecture of aquaporin 0 at a 2.2-A resolution.
Proc Natl Acad Sci U S A. 2004 Sep 28;101(39):14045-50
PMID: 15377788
-
Structure of a glycerol-conducting channel and the basis for its selectivity.
Science. 2000 Oct 20;290(5491):481-6
PMID: 11039922
-
Update of the CHARMM all-atom additive force field for lipids: validation on six lipid types.
J Phys Chem B. 2010 Jun 17;114(23):7830-43
PMID: 20496934
-
Structural mechanism of plant aquaporin gating.
Nature. 2006 Feb 9;439(7077):688-94
PMID: 16340961
-
A short history of SHELX.
Acta Crystallogr A. 2008 Jan;64(Pt 1):112-22
PMID: 18156677
-
Energetic optimization of ion conduction rate by the K+ selectivity filter.
Nature. 2001 Nov 1;414(6859):37-42
PMID: 11689935
-
Molecular basis of proton blockage in aquaporins.
Structure. 2004 Jan;12(1):65-74
PMID: 14725766
-
Crystal structure of a yeast aquaporin at 1.15 angstrom reveals a novel gating mechanism.
PLoS Biol. 2009 Jun;7(6):e1000130
PMID: 19529756
-
Architecture and selectivity in aquaporins: 2.5 a X-ray structure of aquaporin Z.
PLoS Biol. 2003 Dec;1(3):E72
PMID: 14691544
-
The mechanism of proton exclusion in the aquaporin-1 water channel.
J Mol Biol. 2003 Oct 17;333(2):279-93
PMID: 14529616
-
VMD: visual molecular dynamics.
J Mol Graph. 1996 Feb;14(1):33-8, 27-8
PMID: 8744570
-
Extending the treatment of backbone energetics in protein force fields: limitations of gas-phase quantum mechanics in reproducing protein conformational distributions in molecular dynamics simulations.
J Comput Chem. 2004 Aug;25(11):1400-15
PMID: 15185334
-
Water permeation across biological membranes: mechanism and dynamics of aquaporin-1 and GlpF.
Science. 2001 Dec 14;294(5550):2353-7
PMID: 11743202
-
OPM: orientations of proteins in membranes database.
Bioinformatics. 2006 Mar 1;22(5):623-5
PMID: 16397007
-
Structural basis of water-specific transport through the AQP1 water channel.
Nature. 2001 Dec 20-27;414(6866):872-8
PMID: 11780053
-
Structural basis for conductance by the archaeal aquaporin AqpM at 1.68 A.
Proc Natl Acad Sci U S A. 2005 Dec 27;102(52):18932-7
PMID: 16361443
-
MolProbity: all-atom structure validation for macromolecular crystallography.
Acta Crystallogr D Biol Crystallogr. 2010 Jan;66(Pt 1):12-21
PMID: 20057044
-
High-resolution x-ray structure of human aquaporin 5.
Proc Natl Acad Sci U S A. 2008 Sep 9;105(36):13327-32
PMID: 18768791
-
Structural determinants of water permeation through aquaporin-1.
Nature. 2000 Oct 5;407(6804):599-605
PMID: 11034202
-
What really prevents proton transport through aquaporin? Charge self-energy versus proton wire proposals.
Biophys J. 2003 Dec;85(6):3696-706
PMID: 14645061
-
Enhancement of proton conductance by mutations of the selectivity filter of aquaporin-1.
J Mol Biol. 2011 Apr 8;407(4):607-20
PMID: 21277313
-
Scalable molecular dynamics with NAMD.
J Comput Chem. 2005 Dec;26(16):1781-802
PMID: 16222654
-
Crystal structure of human aquaporin 4 at 1.8 A and its mechanism of conductance.
Proc Natl Acad Sci U S A. 2009 May 5;106(18):7437-42
PMID: 19383790
-
Integration, scaling, space-group assignment and post-refinement.
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):133-44
PMID: 20124693
-
CHARMM-GUI: a web-based graphical user interface for CHARMM.
J Comput Chem. 2008 Aug;29(11):1859-65
PMID: 18351591
-
The mechanism of proton exclusion in aquaporin channels.
Proteins. 2004 May 1;55(2):223-8
PMID: 15048815
-
Concerted action of two cation filters in the aquaporin water channel.
EMBO J. 2009 Aug 5;28(15):2188-94
PMID: 19574955
-
The dynamics and energetics of water permeation and proton exclusion in aquaporins.
Curr Opin Struct Biol. 2005 Apr;15(2):176-83
PMID: 15837176
-
Requirement for asparagine in the aquaporin NPA sequence signature motifs for cation exclusion.
FEBS J. 2011 Mar;278(5):740-8
PMID: 21205205
-
Chemistry of ion coordination and hydration revealed by a K+ channel-Fab complex at 2.0 A resolution.
Nature. 2001 Nov 1;414(6859):43-8
PMID: 11689936
-
Data processing and analysis with the autoPROC toolbox.
Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):293-302
PMID: 21460447
-
Electrostatic tuning of permeation and selectivity in aquaporin water channels.
Biophys J. 2003 Nov;85(5):2884-99
PMID: 14581193
-
Crystal structure of the aquaglyceroporin PfAQP from the malarial parasite Plasmodium falciparum.
Nat Struct Mol Biol. 2008 Jun;15(6):619-25
PMID: 18500352
-
Aquaporin-0 membrane junctions reveal the structure of a closed water pore.
Nature. 2004 May 13;429(6988):193-7
PMID: 15141214