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PMID: 23624110 Published · ppublish English Journal Article Research Support, N.I.H., Extramural

Reconstitution of selenocysteine incorporation reveals intrinsic regulation by SECIS elements.

Journal of molecular biology ·Vol. 425 ·No. 14 ·2013-07-24 ·Pages 2415-22

Gupta N, DeMong LW, Banda S, Copeland PR

Abstract

Selenoproteins are present in all three domains of life and are responsible for a major part of a cell's antioxidant defense against reactive oxygen species. Synthesis of selenoproteins requires the decoding of a UGA codon as selenocysteine (Sec) instead of translation termination. Sec is incorporated into the growing polypeptide chain during translation elongation and is known to require a set of highly specific factors: the Sec insertion sequence (SECIS) element in the 3' untranslated region, Sec-tRNA(Sec), the Sec-specific elongation factor eEFSec, and SECIS binding protein 2. Since reconstitution has not been reported, whether these factors are sufficient is unknown. Here, we report a novel in vitro translation system in which Sec incorporation has been reconstituted from purified components introduced into a Sec naive system. In addition, we developed a novel method to purify Sec-tRNA(Sec) and active eEFSec/GTP/tRNA ternary complex. We found that the known basal factors are sufficient for Sec incorporation in vitro. Using this highly manipulable system, we have also found that ribosomes from non-Sec-utilizing organisms cannot support Sec incorporation and that some SECIS elements are intrinsically less efficient than others. Having identified the essential set of factors, this work removes a significant barrier to our understanding of the mechanism of Sec incorporation.

MeSH Terms
3' Untranslated Regions Animals Cell Extracts Cell-Free System Codon, Terminator Male Peptide Elongation Factors/metabolism Protein Biosynthesis RNA, Messenger/genetics RNA, Transfer, Amino Acid-Specific/genetics,metabolism RNA-Binding Proteins/metabolism Rats Ribosomes/metabolism Selenocysteine/genetics,metabolism Testis
Chemicals
3' Untranslated Regions Cell Extracts Codon, Terminator Peptide Elongation Factors RNA, Messenger RNA, Transfer, Amino Acid-Specific RNA-Binding Proteins tRNA, selenocysteine- Selenocysteine
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Gupta Nirupama
Department of Biochemistry and Molecular Biology, University of Medicine and Dentistry of New Jersey, Robert Wood Johnson Medical School, 675 Hoes Lane, Piscataway, NJ 08854, USA.
DeMong Louise W
Banda Sowmya
Copeland Paul R
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Article Info
Journal
Journal of molecular biology
Abbr.
J Mol Biol
ISSN
1089-8638
Published
2013-07-24
Epub
2013-00-23
Pages
2415-22
Language
English
Region
England
NLM ID
2985088R
PMCID
PMC3699960
Subset
IM
Grants
NIGMS NIH HHS · R01 GM077073 · United States
NIGMS NIH HHS · R01 GM094833 · United States
NIGMS NIH HHS · GM094833 · United States
NIGMS NIH HHS · GM077073 · United States
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