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PMID: 22885821 Published · ppublish English Journal Article Review

The use of metabolomics to dissect plant responses to abiotic stresses.

Cellular and molecular life sciences : CMLS ·Vol. 69 ·No. 19 ·2012-10-00 ·Pages 3225-43

Obata T, Fernie AR

Abstract

Plant metabolism is perturbed by various abiotic stresses. As such the metabolic network of plants must be reconfigured under stress conditions in order to allow both the maintenance of metabolic homeostasis and the production of compounds that ameliorate the stress. The recent development and adoption of metabolomics and systems biology approaches enable us not only to gain a comprehensive overview, but also a detailed analysis of crucial components of the plant metabolic response to abiotic stresses. In this review we introduce the analytical methods used for plant metabolomics and describe their use in studies related to the metabolic response to water, temperature, light, nutrient limitation, ion and oxidative stresses. Both similarity and specificity of the metabolic responses against diverse abiotic stress are evaluated using data available in the literature. Classically discussed stress compounds such as proline, γ-amino butyrate and polyamines are reviewed, and the widespread importance of branched chain amino acid metabolism under stress condition is discussed. Finally, where possible, mechanistic insights into metabolic regulatory processes are discussed.

MeSH Terms
Amino Acids, Branched-Chain/metabolism Chromatography, Liquid Electrophoresis, Capillary Gas Chromatography-Mass Spectrometry Iron/metabolism Light Magnetic Resonance Spectroscopy Metabolomics/methods Oxidative Stress Plants/metabolism Stress, Physiological Temperature Water
Chemicals
Amino Acids, Branched-Chain Water Iron
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Obata Toshihiro
Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.
Fernie Alisdair R
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Article Info
Journal
Cellular and molecular life sciences : CMLS
Abbr.
Cell Mol Life Sci
ISSN
1420-9071
DOI
10.1007/s00018-012-1091-5
Published
2012-10-00
Epub
2012-00-12
Pages
3225-43
Language
English
Region
Switzerland
NLM ID
9705402
PMCID
PMC3437017
Subset
IM
External Links
PubMed source DOI: 10.1007/s00018-012-1091-5 PMC Full Text View journal details
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