Home LiteratureArticle Details
PMID: 22358837 Published · epublish English Journal Article

The case for open computer programs.

Nature ·Vol. 482 ·No. 7386 ·2012-02-22 ·Pages 485-8

Ince DC, Hatton L, Graham-Cumming J

Abstract

Scientific communication relies on evidence that cannot be entirely included in publications, but the rise of computational science has added a new layer of inaccessibility. Although it is now accepted that data should be made available on request, the current regulations regarding the availability of software are inconsistent. We argue that, with some exceptions, anything less than the release of source programs is intolerable for results that depend on computation. The vagaries of hardware, software and natural language will always ensure that exact reproducibility remains uncertain, but withholding code increases the chances that efforts to reproduce results will fail.

MeSH Terms
Algorithms Editorial Policies Information Dissemination Intellectual Property Periodicals as Topic/standards Publishing/standards Reproducibility of Results Research/standards Research Design Software
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Ince Darrel C
Department of Computing Open University, Walton Hall, Milton Keynes MK7 6AA, UK. d.c.ince@open.ac.uk
Hatton Leslie
Graham-Cumming John
References (6)
6 references, click to expand
  1. An invitation to reproducible computational research.
    Biostatistics. 2010 Jul;11(3):385-8 PMID: 20538873
  2. Devil in the details.
    Nature. 2011 Feb 17;470(7334):305-6 PMID: 21330998
  3. Computer science. Accessible reproducible research.
    Science. 2010 Jan 22;327(5964):415-6 PMID: 20093459
  4. Publish your computer code: it is good enough.
    Nature. 2010 Oct 14;467(7317):753 PMID: 20944687
  5. Making data maximally available.
    Science. 2011 Feb 11;331(6018):649 PMID: 21310971
  6. Computational science: ...Error.
    Nature. 2010 Oct 14;467(7317):775-7 PMID: 20944712
Article Info
Journal
Nature
Abbr.
Nature
ISSN
1476-4687
Published
2012-02-22
Epub
2012-00-22
Pages
485-8
Language
English
Region
England
NLM ID
0410462
Subset
IM
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