Home LiteratureArticle Details
PMID: 22330449 Published · ppublish English Journal Article

Wavelet analysis for single molecule localization microscopy.

Optics express ·Vol. 20 ·No. 3 ·2012-01-30 ·Pages 2081-95

Izeddin I, Boulanger J, Racine V, Specht CG, Kechkar A, Nair D, Triller A, Choquet D, Dahan M, Sibarita JB

Abstract

Localization of single molecules in microscopy images is a key step in quantitative single particle data analysis. Among them, single molecule based super-resolution optical microscopy techniques require high localization accuracy as well as computation of large data sets in the order of 10(5) single molecule detections to reconstruct a single image. We hereby present an algorithm based on image wavelet segmentation and single particle centroid determination, and compare its performance with the commonly used gaussian fitting of the point spread function. We performed realistic simulations at different signal-to-noise ratios and particle densities and show that the calculation time using the wavelet approach can be more than one order of magnitude faster than that of gaussian fitting without a significant degradation of the localization accuracy, from 1 nm to 4 nm in our range of study. We propose a simulation-based estimate of the resolution of an experimental single molecule acquisition.

MeSH Terms
Image Interpretation, Computer-Assisted/methods Microscopy/methods Molecular Imaging/methods Nanoparticles/ultrastructure Wavelet Analysis
Authors & Affiliations
10 authors, click to expand affiliations / ORCID
Izeddin I
Laboratoire Kastler Brossel, CNRS UMR 8552, Département de Physique et Institut de Biologie de l’Ecole Normale Supérieure, Université Pierre et Marie Curie-Paris 6, 46 rue d’Ulm 75005 Paris, France.
Boulanger J
Racine V
Specht C G
Kechkar A
Nair D
Triller A
Choquet D
Dahan M
Sibarita J B
Article Info
Journal
Optics express
Abbr.
Opt Express
ISSN
1094-4087
Published
2012-01-30
Pages
2081-95
Language
English
Region
United States
NLM ID
101137103
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com