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PMID: 2221359 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

A rapid, high resolution DNA sequencing gel system.

Analytical biochemistry ·Vol. 188 ·No. 1 ·1990-07-00 ·Pages 176-80

Lang BF, Burger G

Abstract

We have developed a simple method which significantly increases the efficiency of manual DNA sequencing. This method increases both the ease of gel preparation and the quality of fragment resolution. Our system involves (i) casting of gels horizontally, without sealing around the plates; (ii) the use of a self-forming buffer gradient to stack bands in the lower part of the gel; (iii) separation of the samples on two 0.2-mm-thick acrylamide gels (4.5 and 4%) with overlapping readings; (iv) "nonsmiling" electrophoresis with very simple, self-made electrophoresis stands; and (v) prior to exposure in situ dry fixation of the gel matrix to the glass support without previous covalent binding of the gel. On average, we are able to read from nucleotide position 50 to position 600 without ambiguity.

MeSH Terms
Acrylamides Autoradiography DNA/analysis Electrophoresis, Polyacrylamide Gel Indicators and Reagents Nucleotide Mapping/methods Sulfur Radioisotopes
Chemicals
Acrylamides Indicators and Reagents Sulfur Radioisotopes DNA
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Lang B F
Université de Montréal, Département de Biochimie, Quebec, Canada.
Burger G
Article Info
Journal
Analytical biochemistry
Abbr.
Anal Biochem
ISSN
0003-2697
Published
1990-07-00
Pages
176-80
Language
English
Region
United States
NLM ID
0370535
Subset
IM
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