Home LiteratureArticle Details
PMID: 22025054 Published · epublish English Journal Article Research Support, Non-U.S. Gov't Review

Transcriptional regulation of macrophage polarization: enabling diversity with identity.

Nature reviews. Immunology ·Vol. 11 ·No. 11 ·2011-10-25 ·Pages 750-61

Lawrence T, Natoli G

Abstract

In terms of both phenotype and function, macrophages have remarkable heterogeneity, which reflects the specialization of tissue-resident macrophages in microenvironments as different as liver, brain and bone. Also, marked changes in the activity and gene expression programmes of macrophages can occur when they come into contact with invading microorganisms or injured tissues. Therefore, the macrophage lineage includes a remarkable diversity of cells with different functions and functional states that are specified by a complex interplay between microenvironmental signals and a hardwired differentiation programme that determines macrophage identity. In this Review, we summarize the current knowledge of transcriptional and chromatin-mediated control of macrophage polarization in physiology and disease.

MeSH Terms
Gene Expression Regulation Humans Interferon Regulatory Factors/metabolism Macrophages/classification,immunology,metabolism PPAR gamma/metabolism Promoter Regions, Genetic/genetics Protein Binding STAT1 Transcription Factor/metabolism STAT6 Transcription Factor/metabolism
Chemicals
IRF5 protein, human Interferon Regulatory Factors PPAR gamma STAT1 Transcription Factor STAT6 Transcription Factor interferon regulatory factor-4
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Lawrence Toby
Centre d'Immunologie Marseille-Luminy, Parc Scientifique & Technologique de Luminy, Case 906, F-13288 Marseille, France. lawrence@ciml.univ-mrs.fr
Natoli Gioacchino
References (88)
88 references, click to expand
  1. Gene-specific control of inflammation by TLR-induced chromatin modifications.
    Nature. 2007 Jun 21;447(7147):972-8 PMID: 17538624
  2. Demonstration of an interferon gamma-dependent tumor surveillance system in immunocompetent mice.
    Proc Natl Acad Sci U S A. 1998 Jun 23;95(13):7556-61 PMID: 9636188
  3. Blood monocytes consist of two principal subsets with distinct migratory properties.
    Immunity. 2003 Jul;19(1):71-82 PMID: 12871640
  4. The peroxisome proliferator-activated receptor-gamma is a negative regulator of macrophage activation.
    Nature. 1998 Jan 1;391(6662):79-82 PMID: 9422508
  5. Essential role of Stat6 in IL-4 signalling.
    Nature. 1996 Apr 18;380(6575):627-30 PMID: 8602263
  6. The Jmjd3-Irf4 axis regulates M2 macrophage polarization and host responses against helminth infection.
    Nat Immunol. 2010 Oct;11(10):936-44 PMID: 20729857
  7. Immune response in Stat2 knockout mice.
    Immunity. 2000 Dec;13(6):795-804 PMID: 11163195
  8. High-resolution mapping and characterization of open chromatin across the genome.
    Cell. 2008 Jan 25;132(2):311-22 PMID: 18243105
  9. Immunodeficiency and chronic myelogenous leukemia-like syndrome in mice with a targeted mutation of the ICSBP gene.
    Cell. 1996 Oct 18;87(2):307-17 PMID: 8861914
  10. Jmjd3 contributes to the control of gene expression in LPS-activated macrophages.
    EMBO J. 2009 Nov 4;28(21):3341-52 PMID: 19779457
  11. Characterization of the interferon-producing cell in mice infected with Listeria monocytogenes.
    PLoS Pathog. 2009 Mar;5(3):e1000355 PMID: 19325882
  12. PU.1 induces myeloid lineage commitment in multipotent hematopoietic progenitors.
    Genes Dev. 1998 Aug 1;12(15):2403-12 PMID: 9694804
  13. Systems biology approaches identify ATF3 as a negative regulator of Toll-like receptor 4.
    Nature. 2006 May 11;441(7090):173-8 PMID: 16688168
  14. Regulation of B lymphocyte and macrophage development by graded expression of PU.1.
    Science. 2000 May 26;288(5470):1439-41 PMID: 10827957
  15. Binding to nonmethylated CpG DNA is essential for target recognition, transactivation, and myeloid transformation by an MLL oncoprotein.
    Mol Cell Biol. 2004 Dec;24(23):10470-8 PMID: 15542854
  16. Regulation of immunity and oncogenesis by the IRF transcription factor family.
    Cancer Immunol Immunother. 2010 Apr;59(4):489-510 PMID: 20049431
  17. Histone H3K27ac separates active from poised enhancers and predicts developmental state.
    Proc Natl Acad Sci U S A. 2010 Dec 14;107(50):21931-6 PMID: 21106759
  18. A SUMOylation-dependent pathway mediates transrepression of inflammatory response genes by PPAR-gamma.
    Nature. 2005 Sep 29;437(7059):759-63 PMID: 16127449
  19. The macrophage: past, present and future.
    Eur J Immunol. 2007 Nov;37 Suppl 1:S9-17 PMID: 17972350
  20. CD4(+) T cells regulate pulmonary metastasis of mammary carcinomas by enhancing protumor properties of macrophages.
    Cancer Cell. 2009 Aug 4;16(2):91-102 PMID: 19647220
  21. Selective and antagonistic functions of SWI/SNF and Mi-2beta nucleosome remodeling complexes during an inflammatory response.
    Genes Dev. 2006 Feb 1;20(3):282-96 PMID: 16452502
  22. Targeted disruption of the mouse Stat1 gene results in compromised innate immunity to viral disease.
    Cell. 1996 Feb 9;84(3):443-50 PMID: 8608598
  23. Microbial stimulation fully differentiates monocytes to DC-SIGN/CD209(+) dendritic cells for immune T cell areas.
    Cell. 2010 Oct 29;143(3):416-29 PMID: 21029863
  24. IRF5 promotes inflammatory macrophage polarization and TH1-TH17 responses.
    Nat Immunol. 2011 Mar;12(3):231-8 PMID: 21240265
  25. Tumor-induced tolerance and immune suppression depend on the C/EBPbeta transcription factor.
    Immunity. 2010 Jun 25;32(6):790-802 PMID: 20605485
  26. PPARgamma activation primes human monocytes into alternative M2 macrophages with anti-inflammatory properties.
    Cell Metab. 2007 Aug;6(2):137-43 PMID: 17681149
  27. CpG-binding protein (CXXC finger protein 1) is a component of the mammalian Set1 histone H3-Lys4 methyltransferase complex, the analogue of the yeast Set1/COMPASS complex.
    J Biol Chem. 2005 Dec 16;280(50):41725-31 PMID: 16253997
  28. TLR4, but not TLR2, mediates IFN-beta-induced STAT1alpha/beta-dependent gene expression in macrophages.
    Nat Immunol. 2002 Apr;3(4):392-8 PMID: 11896392
  29. The healing myocardium sequentially mobilizes two monocyte subsets with divergent and complementary functions.
    J Exp Med. 2007 Nov 26;204(12):3037-47 PMID: 18025128
  30. Monocytes join the dendritic cell family.
    Cell. 2010 Oct 29;143(3):339-40 PMID: 21029856
  31. CpG islands and the regulation of transcription.
    Genes Dev. 2011 May 15;25(10):1010-22 PMID: 21576262
  32. Control of inducible gene expression by signal-dependent transcriptional elongation.
    Cell. 2009 Jul 10;138(1):129-45 PMID: 19596240
  33. Redundancy of C/EBP alpha, -beta, and -delta in supporting the lipopolysaccharide-induced transcription of IL-6 and monocyte chemoattractant protein-1.
    J Immunol. 1998 Mar 1;160(5):2334-42 PMID: 9498774
  34. Peroxisome proliferator-activated receptor gamma (PPARgamma) ligands reverse CTL suppression by alternatively activated (M2) macrophages in cancer.
    Blood. 2006 Jul 15;108(2):525-35 PMID: 16527895
  35. STAT6 transcription factor is a facilitator of the nuclear receptor PPARγ-regulated gene expression in macrophages and dendritic cells.
    Immunity. 2010 Nov 24;33(5):699-712 PMID: 21093321
  36. Alternative macrophage activation is essential for survival during schistosomiasis and downmodulates T helper 1 responses and immunopathology.
    Immunity. 2004 May;20(5):623-35 PMID: 15142530
  37. Impaired B cell development and proliferation in absence of phosphoinositide 3-kinase p85alpha.
    Science. 1999 Jan 15;283(5400):393-7 PMID: 9888855
  38. Exploring the full spectrum of macrophage activation.
    Nat Rev Immunol. 2008 Dec;8(12):958-69 PMID: 19029990
  39. Granulocyte-macrophage colony-stimulating factor (CSF) and macrophage CSF-dependent macrophage phenotypes display differences in cytokine profiles and transcription factor activities: implications for CSF blockade in inflammation.
    J Immunol. 2007 Apr 15;178(8):5245-52 PMID: 17404308
  40. Epigenetic regulation of the alternatively activated macrophage phenotype.
    Blood. 2009 Oct 8;114(15):3244-54 PMID: 19567879
  41. Macrophages: obligate partners for tumor cell migration, invasion, and metastasis.
    Cell. 2006 Jan 27;124(2):263-6 PMID: 16439202
  42. C/EBP beta gene inactivation causes both impaired and enhanced gene expression and inverse regulation of IL-12 p40 and p35 mRNAs in macrophages.
    J Immunol. 2002 Apr 15;168(8):4055-62 PMID: 11937564
  43. Integral role of IRF-5 in the gene induction programme activated by Toll-like receptors.
    Nature. 2005 Mar 10;434(7030):243-9 PMID: 15665823
  44. Alternative activation of macrophages: an immunologic functional perspective.
    Annu Rev Immunol. 2009;27:451-83 PMID: 19105661
  45. Phosphorylation of the Stat1 transactivation domain is required for full-fledged IFN-gamma-dependent innate immunity.
    Immunity. 2003 Dec;19(6):793-802 PMID: 14670297
  46. Extensive chromatin remodelling and establishment of transcription factor 'hotspots' during early adipogenesis.
    EMBO J. 2011 Apr 20;30(8):1459-72 PMID: 21427703
  47. The kinases MSK1 and MSK2 act as negative regulators of Toll-like receptor signaling.
    Nat Immunol. 2008 Sep;9(9):1028-36 PMID: 18690222
  48. The histone H3 lysine-27 demethylase Jmjd3 links inflammation to inhibition of polycomb-mediated gene silencing.
    Cell. 2007 Sep 21;130(6):1083-94 PMID: 17825402
  49. A CREB-C/EBPbeta cascade induces M2 macrophage-specific gene expression and promotes muscle injury repair.
    Proc Natl Acad Sci U S A. 2009 Oct 13;106(41):17475-80 PMID: 19805133
  50. IL-4-induced STAT6 suppresses IFN-gamma-stimulated STAT1-dependent transcription in mouse macrophages.
    J Immunol. 1997 Dec 1;159(11):5474-82 PMID: 9548487
  51. Transcriptional profiling of the human monocyte-to-macrophage differentiation and polarization: new molecules and patterns of gene expression.
    J Immunol. 2006 Nov 15;177(10):7303-11 PMID: 17082649
  52. Macrophages, inflammation, and insulin resistance.
    Annu Rev Physiol. 2010;72:219-46 PMID: 20148674
  53. The biology of myeloid-derived suppressor cells: the blessing and the curse of morphological and functional heterogeneity.
    Eur J Immunol. 2010 Nov;40(11):2969-75 PMID: 21061430
  54. Selective transcription in response to an inflammatory stimulus.
    Cell. 2010 Mar 19;140(6):833-44 PMID: 20303874
  55. PU. 1 is not essential for early myeloid gene expression but is required for terminal myeloid differentiation.
    Immunity. 1995 Dec;3(6):703-14 PMID: 8777716
  56. A unique chromatin signature uncovers early developmental enhancers in humans.
    Nature. 2011 Feb 10;470(7333):279-83 PMID: 21160473
  57. Alternative activation of macrophages: mechanism and functions.
    Immunity. 2010 May 28;32(5):593-604 PMID: 20510870
  58. Targeted disruption of the Stat1 gene in mice reveals unexpected physiologic specificity in the JAK-STAT signaling pathway.
    Cell. 1996 Feb 9;84(3):431-42 PMID: 8608597
  59. Jak-STAT pathways and transcriptional activation in response to IFNs and other extracellular signaling proteins.
    Science. 1994 Jun 3;264(5164):1415-21 PMID: 8197455
  60. Interleukin-4 induced interferon regulatory factor (Irf) 4 participates in the regulation of alternative macrophage priming.
    Immunobiology. 2010 Sep-Oct;215(9-10):821-5 PMID: 20580461
  61. Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities.
    Mol Cell. 2010 May 28;38(4):576-89 PMID: 20513432
  62. Suppression of inflammation by a synthetic histone mimic.
    Nature. 2010 Dec 23;468(7327):1119-23 PMID: 21068722
  63. Histone modifications at human enhancers reflect global cell-type-specific gene expression.
    Nature. 2009 May 7;459(7243):108-12 PMID: 19295514
  64. A distinct and unique transcriptional program expressed by tumor-associated macrophages (defective NF-kappaB and enhanced IRF-3/STAT1 activation).
    Blood. 2006 Mar 1;107(5):2112-22 PMID: 16269622
  65. Identification and characterization of enhancers controlling the inflammatory gene expression program in macrophages.
    Immunity. 2010 Mar 26;32(3):317-28 PMID: 20206554
  66. Integration of external signaling pathways with the core transcriptional network in embryonic stem cells.
    Cell. 2008 Jun 13;133(6):1106-17 PMID: 18555785
  67. Endotoxin tolerance: new mechanisms, molecules and clinical significance.
    Trends Immunol. 2009 Oct;30(10):475-87 PMID: 19781994
  68. Transcription factors in myeloid development: balancing differentiation with transformation.
    Nat Rev Immunol. 2007 Feb;7(2):105-17 PMID: 17259967
  69. Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome.
    Nat Genet. 2007 Mar;39(3):311-8 PMID: 17277777
  70. Transcriptional control of granulocyte and monocyte development.
    Oncogene. 2007 Oct 15;26(47):6816-28 PMID: 17934488
  71. Genome-wide analysis of simultaneous GATA1/2, RUNX1, FLI1, and SCL binding in megakaryocytes identifies hematopoietic regulators.
    Dev Cell. 2011 May 17;20(5):597-609 PMID: 21571218
  72. Antiinflammatory cAMP signaling and cell migration genes co-opted by the anthrax bacillus.
    Proc Natl Acad Sci U S A. 2008 Apr 22;105(16):6150-5 PMID: 18427110
  73. Macrophage-specific PPARgamma controls alternative activation and improves insulin resistance.
    Nature. 2007 Jun 28;447(7148):1116-20 PMID: 17515919
  74. SHIP represses the generation of alternatively activated macrophages.
    Immunity. 2005 Oct;23(4):361-74 PMID: 16226502
  75. Class-specific regulation of pro-inflammatory genes by MyD88 pathways and IkappaBzeta.
    J Biol Chem. 2008 May 2;283(18):12468-77 PMID: 18319258
  76. Wdr82 is a C-terminal domain-binding protein that recruits the Setd1A Histone H3-Lys4 methyltransferase complex to transcription start sites of transcribed human genes.
    Mol Cell Biol. 2008 Jan;28(2):609-18 PMID: 17998332
  77. Analyzing classical and alternative macrophage activation in macrophage/neutrophil-specific IL-4 receptor-alpha-deficient mice.
    Methods Mol Biol. 2009;531:225-52 PMID: 19347321
  78. Tumors induce a subset of inflammatory monocytes with immunosuppressive activity on CD8+ T cells.
    J Clin Invest. 2006 Oct;116(10):2777-90 PMID: 17016559
  79. Determinants of nucleosome organization in primary human cells.
    Nature. 2011 May 22;474(7352):516-20 PMID: 21602827
  80. Human macrophage activation programs induced by bacterial pathogens.
    Proc Natl Acad Sci U S A. 2002 Feb 5;99(3):1503-8 PMID: 11805289
  81. Interleukin-4-dependent production of PPAR-gamma ligands in macrophages by 12/15-lipoxygenase.
    Nature. 1999 Jul 22;400(6742):378-82 PMID: 10432118
  82. Molecular mechanisms of the anti-inflammatory functions of interferons.
    Immunobiology. 2007;212(9-10):895-901 PMID: 18086388
  83. Toll-like receptor-induced arginase 1 in macrophages thwarts effective immunity against intracellular pathogens.
    Nat Immunol. 2008 Dec;9(12):1399-406 PMID: 18978793
  84. A unifying model for the selective regulation of inducible transcription by CpG islands and nucleosome remodeling.
    Cell. 2009 Jul 10;138(1):114-28 PMID: 19596239
  85. Blood monocytes: development, heterogeneity, and relationship with dendritic cells.
    Annu Rev Immunol. 2009;27:669-92 PMID: 19132917
  86. Monocyte and macrophage heterogeneity.
    Nat Rev Immunol. 2005 Dec;5(12):953-64 PMID: 16322748
  87. Maintaining cell identity through global control of genomic organization.
    Immunity. 2010 Jul 23;33(1):12-24 PMID: 20643336
  88. Inflammatory monocytes recruited after skeletal muscle injury switch into antiinflammatory macrophages to support myogenesis.
    J Exp Med. 2007 May 14;204(5):1057-69 PMID: 17485518
Article Info
Journal
Nature reviews. Immunology
Abbr.
Nat Rev Immunol
ISSN
1474-1741
Published
2011-10-25
Epub
2011-00-25
Pages
750-61
Language
English
Region
England
NLM ID
101124169
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com