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PMID: 2186027 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Sensitive, soluble chromogenic substrates for HIV-1 proteinase.

The Journal of biological chemistry ·Vol. 265 ·No. 14 ·1990-05-15 ·Pages 7733-6

Richards AD, Phylip LH, Farmerie WG, Scarborough PE, Alvarez A, Dunn BM, Hirel PH, Konvalinka J, Strop P, Pavlickova L

Abstract

By replacement of the P1' residue in a capsid/nucleocapsid cleavage site mimic with 4-NO2-phenylalanine (Nph), an excellent chromogenic substrate, Lys-Ala-Arg-Val-Leu*Nph-Glu-Ala-Met, for HIV-1 proteinase (kappa cat = 20 s-1, Km = 22 microM) has been prepared. Substitution of the Leu residue in P1 with norleucine, Met, Phe, or Tyr had minimal effects on the kinetic parameters (kappa cat and kappa cat/Km) determined at different pH values, whereas peptides containing Ile or Val in P1 were hydrolyzed extremely slowly. The spectrophotometric assay has been used to characterize the proteinase further with respect to pH dependence, ionic strength dependence, and the effect of competitive inhibitors of various types.

MeSH Terms
Amino Acid Sequence Binding, Competitive Chromogenic Compounds/chemical synthesis,metabolism Endopeptidases/metabolism Gene Products, gag/metabolism Gene Products, pol/metabolism HIV Protease HIV-1/enzymology Hydrogen-Ion Concentration Hydrolysis Kinetics Molecular Sequence Data Oligopeptides/chemical synthesis,metabolism Osmolar Concentration Peptide Fragments/metabolism Phenylalanine/analogs & derivatives Protease Inhibitors Spectrophotometry Structure-Activity Relationship Substrate Specificity
Chemicals
Chromogenic Compounds Gene Products, gag Gene Products, pol Oligopeptides Peptide Fragments Protease Inhibitors 4-nitrophenylalanine Phenylalanine Endopeptidases HIV Protease
Authors & Affiliations
10 authors, click to expand affiliations / ORCID
Richards A D
Department of Biochemistry, University of Wales College of Cardiff, United Kingdom.
Phylip L H
Farmerie W G
Scarborough P E
Alvarez A
Dunn B M
Hirel P H
Konvalinka J
Strop P
Pavlickova L
Article Info
Journal
The Journal of biological chemistry
Abbr.
J Biol Chem
ISSN
0021-9258
Published
1990-05-15
Pages
7733-6
Language
English
Region
United States
NLM ID
2985121R
Subset
IM
Grants
NIAID NIH HHS · AI 28571 · United States
NIADDK NIH HHS · AM 18865 · United States
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