Abstract
Two closely linked genes involved in the regulation of exopolysaccharide (EPS) production in Rhizobium sp. strain NGR234, exoX and exoY, were sequenced, and their corresponding phenotypes were investigated. Inhibition of EPS synthesis occurred in wild-type strains when extra copies of exoX were introduced, but only when exoY had been deleted or mutated or was present at a lower copy number. Normal EPS synthesis occurred in Rhizobium sp. when both exoX and exoY were introduced on the same replicon. Surprisingly, the presence of multiple copies of exoY in exoY:: Tn5 mutants of NGR234 adversely affected cellular growth. This was apparent when exoY was introduced into exoY mutants on IncP1 vectors, where the copy number was approximately 10, but was not apparent when present on much larger R-prime plasmids with lower copy numbers (approximately 3 per cell). Multiple copies of exoX did not adversely affect cellular growth of any strain. The exoX gene appeared analogous, in size and phenotype, to a previously described Rhizobium leguminosarum biovar phaseoli EPS gene, psi (D. Borthakur and A.W.B. Johnston, Mol. Gen. Genet. 207:149-154, 1987), and the deduced ExoX and Psi shared strikingly similar secondary structures. Despite this, ExoX and Psi showed little homology at the primary amino acid level, except for a central region of 18 amino acids. The interaction of ExoX and ExoY could form the basis of a sensitive regulatory system for EPS acids. The interaction of ExoX and ExoY could form the basis of a sensitive regulatory system for EPS biosynthesis. The presence of a multicopy exoX in Rhizobium meliloti and R. fredii similarly abolished EPS biosynthesis in these species.
MeSH Terms
Base Sequence
DNA Transposable Elements
DNA, Bacterial/analysis
Genes, Bacterial
Genes, Regulator
Molecular Sequence Data
Phenotype
Polysaccharides, Bacterial/biosynthesis,genetics
Promoter Regions, Genetic
Protein Biosynthesis
Rhizobium/genetics,metabolism
Transcription, Genetic
Chemicals
DNA Transposable Elements
DNA, Bacterial
Polysaccharides, Bacterial
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Gray J X
Plant Microbe Interactions Group, Research School of Biological Sciences, Australian National University, Canberra, A.C.T.
Djordjevic M A
Rolfe B G
References (32)
32 references, click to expand
-
Mapping of gene transcripts by nuclease protection assays and cDNA primer extension.
Methods Enzymol. 1987;152:611-32
PMID: 2821358
-
Broad host range DNA cloning system for gram-negative bacteria: construction of a gene bank of Rhizobium meliloti.
Proc Natl Acad Sci U S A. 1980 Dec;77(12):7347-51
PMID: 7012838
-
Expression of symbiotic genes of Rhizobium japonicum USDA 191 in other rhizobia.
J Bacteriol. 1985 Jul;163(1):385-8
PMID: 2989250
-
Exopolysaccharide-deficient mutants of Rhizobium meliloti that form ineffective nodules.
Proc Natl Acad Sci U S A. 1985 Sep;82(18):6231-5
PMID: 3862129
-
Symbiotic nitrogen fixation: molecular cloning of Rhizobium genes involved in exopolysaccharide synthesis and effective nodulation.
J Mol Appl Genet. 1982;1(6):585-96
PMID: 6296257
-
Recognition of protein coding regions in DNA sequences.
Nucleic Acids Res. 1982 Sep 11;10(17):5303-18
PMID: 7145702
-
Translational initiation in prokaryotes.
Annu Rev Microbiol. 1981;35:365-403
PMID: 6170248
-
A simple method for displaying the hydropathic character of a protein.
J Mol Biol. 1982 May 5;157(1):105-32
PMID: 7108955
-
Nitrogen fixation ability of exopolysaccharide synthesis mutants of Rhizobium sp. strain NGR234 and Rhizobium trifolii is restored by the addition of homologous exopolysaccharides.
J Bacteriol. 1987 Jan;169(1):53-60
PMID: 3025187
-
A versatile primer for DNA sequencing in the M13mp2 cloning system.
Gene. 1980 Jun;10(1):69-73
PMID: 6250947
-
Sequence of psi, a gene on the symbiotic plasmid of Rhizobium phaseoli which inhibits exopolysaccharide synthesis and nodulation and demonstration that its transcription is inhibited by psr, another gene on the symbiotic plasmid.
Mol Gen Genet. 1987 Apr;207(1):149-54
PMID: 3474492
-
Measurements of the effects that coding for a protein has on a DNA sequence and their use for finding genes.
Nucleic Acids Res. 1984 Jan 11;12(1 Pt 2):551-67
PMID: 6364041
-
Rhizobium-legume nodulation: life together in the underground.
Cell. 1989 Jan 27;56(2):203-14
PMID: 2643474
-
DNA sequence analysis with a modified bacteriophage T7 DNA polymerase.
Proc Natl Acad Sci U S A. 1987 Jul;84(14):4767-71
PMID: 3474623
-
DNA sequencing with chain-terminating inhibitors.
Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7
PMID: 271968
-
Nucleotide sequence of Rhizobium meliloti 1021 nodulation genes: nodD is read divergently from nodABC.
DNA. 1985 Jun;4(3):241-8
PMID: 4006668
-
Nucleotide sequence of Rhizobium meliloti nodulation genes.
Nucleic Acids Res. 1984 Dec 21;12(24):9509-24
PMID: 6336331
-
The human pro-opiomelanocortin gene: organization, sequence, and interspersion with repetitive DNA.
DNA. 1982;1(2):133-43
PMID: 6299668
-
Construction and characterization of new cloning vehicles. II. A multipurpose cloning system.
Gene. 1977;2(2):95-113
PMID: 344137
-
Rhizobium japonicum USDA 191 has two nodD genes that differ in primary structure and function.
J Bacteriol. 1988 Jan;170(1):12-20
PMID: 2826389
-
Sequence diversity among related genes for recognition of specific targets in DNA molecules.
J Mol Biol. 1983 May 5;166(1):1-19
PMID: 6304321
-
Improved free-energy parameters for predictions of RNA duplex stability.
Proc Natl Acad Sci U S A. 1986 Dec;83(24):9373-7
PMID: 2432595
-
Symbiotic mutants of Rhizobium meliloti that uncouple plant from bacterial differentiation.
Cell. 1985 Apr;40(4):869-77
PMID: 2985267
-
Second symbiotic megaplasmid in Rhizobium meliloti carrying exopolysaccharide and thiamine synthesis genes.
J Bacteriol. 1986 Jul;167(1):66-72
PMID: 3013840
-
Genetic analysis of a cluster of genes required for synthesis of the calcofluor-binding exopolysaccharide of Rhizobium meliloti.
J Bacteriol. 1988 Sep;170(9):4239-48
PMID: 2842306
-
Physical and genetic characterization of symbiotic and auxotrophic mutants of Rhizobium meliloti induced by transposon Tn5 mutagenesis.
J Bacteriol. 1982 Jan;149(1):114-22
PMID: 6274841
-
Extended Region of Nodulation Genes in Rhizobium meliloti 1021. II. Nucleotide Sequence, Transcription Start Sites and Protein Products.
Genetics. 1987 Oct;117(2):191-201
PMID: 17246400
-
Transcription termination and the regulation of gene expression.
Annu Rev Biochem. 1986;55:339-72
PMID: 3527045
-
Construction of improved M13 vectors using oligodeoxynucleotide-directed mutagenesis.
Gene. 1983 Dec;26(1):101-6
PMID: 6323249
-
Mechanism and control of transcription initiation in prokaryotes.
Annu Rev Biochem. 1985;54:171-204
PMID: 3896120
-
The effect of interspecies transfer of Rhizobium host-specific nodulation genes on acidic polysaccharide structure and in situ binding by host lectin.
J Biol Chem. 1989 Apr 5;264(10):5710-4
PMID: 2925631
-
Specific binding of proteins from Rhizobium meliloti cell-free extracts containing NodD to DNA sequences upstream of inducible nodulation genes.
Genes Dev. 1988 Mar;2(3):282-93
PMID: 3288541