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PMID: 21448905 Published · ppublish English Comparative Study Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

MicroRNA-328 is associated with (non-small) cell lung cancer (NSCLC) brain metastasis and mediates NSCLC migration.

International journal of cancer ·Vol. 129 ·No. 11 ·2011-12-01 ·Pages 2621-31

Arora S, Ranade AR, Tran NL, Nasser S, Sridhar S, Korn RL, Ross JT, Dhruv H, Foss KM, Sibenaller Z, Ryken T, Gotway MB, Kim S, Weiss GJ

Abstract

Brain metastasis (BM) can affect ∼ 25% of nonsmall cell lung cancer (NSCLC) patients during their lifetime. Efforts to characterize patients that will develop BM have been disappointing. microRNAs (miRNAs) regulate the expression of target mRNAs. miRNAs play a role in regulating a variety of targets and, consequently, multiple pathways, which make them a powerful tool for early detection of disease, risk assessment, and prognosis. We investigated miRNAs that may serve as biomarkers to differentiate between NSCLC patients with and without BM. miRNA microarray profiling was performed on samples from clinically matched NSCLC from seven patients with BM (BM+) and six without BM (BM-). Using t-test and further qRT-PCR validation, eight miRNAs were confirmed to be significantly differentially expressed. Of these, expression of miR-328 and miR-330-3p were able to correctly classify BM+ vs. BM- patients. This classifier was used on a validation cohort (n = 15), and it correctly classified 12/15 patients. Gene expression analysis comparing A549 parental and A549 cells stably transfected to over-express miR-328 (A549-328) identified several significantly differentially expressed genes. PRKCA was one of the genes over-expressed in A549-328 cells. Additionally, A549-328 cells had significantly increased cell migration compared to A549 cells, which was significantly reduced upon PRKCA knockdown. In summary, miR-328 has a role in conferring migratory potential to NSCLC cells working in part through PRKCA and with further corroboration in additional independent cohorts, these miRNAs may be incorporated into clinical treatment decision making to stratify NSCLC patients at higher risk for developing BM.

MeSH Terms
Adenocarcinoma/genetics,secondary Adult Aged Biomarkers, Tumor/genetics,metabolism Blotting, Western Brain Neoplasms/genetics,secondary Carcinoma, Non-Small-Cell Lung/genetics,secondary Carcinoma, Squamous Cell/genetics,secondary Cell Adhesion Cell Movement Cell Proliferation Female Gene Expression Profiling Humans Lung Neoplasms/genetics,pathology Male MicroRNAs/genetics Middle Aged Oligonucleotide Array Sequence Analysis Protein Kinase C-alpha/antagonists & inhibitors,genetics,metabolism RNA, Messenger/genetics RNA, Small Interfering/genetics Reverse Transcriptase Polymerase Chain Reaction Tumor Cells, Cultured
Chemicals
Biomarkers, Tumor MIRN328 microRNA, human MicroRNAs RNA, Messenger RNA, Small Interfering PRKCA protein, human Protein Kinase C-alpha
Authors & Affiliations
14 authors, click to expand affiliations / ORCID
Arora Shilpi
Cancer and Cell Biology Division, Translational Genomics Research Institute, Phoenix, AZ, USA.
Ranade Aarati R
Tran Nhan L
Nasser Sara
Sridhar Shravan
Korn Ronald L
Ross Julianna T D
Dhruv Harshil
Foss Kristen M
Sibenaller Zita
Ryken Timothy
Gotway Michael B
Kim Seungchan
Weiss Glen J
References (39)
39 references, click to expand
  1. miR-34a as a prognostic marker of relapse in surgically resected non-small-cell lung cancer.
    Carcinogenesis. 2009 Nov;30(11):1903-9 PMID: 19736307
  2. Deregulated expression of miR-21, miR-143 and miR-181a in non small cell lung cancer is related to clinicopathologic characteristics or patient prognosis.
    Biomed Pharmacother. 2010 Jul;64(6):399-408 PMID: 20363096
  3. Post-transcriptional regulation of microRNA expression.
    RNA. 2006 Jul;12(7):1161-7 PMID: 16738409
  4. MicroRNA-328 negatively regulates the expression of breast cancer resistance protein (BCRP/ABCG2) in human cancer cells.
    Mol Pharmacol. 2009 Jun;75(6):1374-9 PMID: 19270061
  5. Controlling the false discovery rate in behavior genetics research.
    Behav Brain Res. 2001 Nov 1;125(1-2):279-84 PMID: 11682119
  6. MicroRNA-298 and microRNA-328 regulate expression of mouse beta-amyloid precursor protein-converting enzyme 1.
    J Biol Chem. 2009 Jan 23;284(4):1971-81 PMID: 18986979
  7. Phase III comparison of prophylactic cranial irradiation versus observation in patients with locally advanced non-small-cell lung cancer: primary analysis of radiation therapy oncology group study RTOG 0214.
    J Clin Oncol. 2011 Jan 20;29(3):272-8 PMID: 21135270
  8. The expression of three genes in primary non-small cell lung cancer is associated with metastatic spread to the brain.
    Clin Cancer Res. 2009 Mar 1;15(5):1755-61 PMID: 19190132
  9. Role of KCNMA1 gene in breast cancer invasion and metastasis to brain.
    BMC Cancer. 2009 Jul 29;9:258 PMID: 19640305
  10. MicroRNA expression profiling using microarrays.
    Nat Protoc. 2008;3(4):563-78 PMID: 18388938
  11. Induction of cytokine gene expression in human thyroid epithelial cells irradiated with HZE particles (iron ions).
    Radiat Res. 2009 Oct;172(4):437-43 PMID: 19772464
  12. MicroRNA signature predicts survival and relapse in lung cancer.
    Cancer Cell. 2008 Jan;13(1):48-57 PMID: 18167339
  13. p38 mitogen-activated protein kinase pathway is involved in protein kinase Calpha-regulated invasion in human hepatocellular carcinoma cells.
    Cancer Res. 2007 May 1;67(9):4320-7 PMID: 17483345
  14. Number of metastatic sites is a strong predictor of survival in patients with nonsmall cell lung cancer with or without brain metastases.
    Cancer. 2009 Jul 1;115(13):2930-8 PMID: 19441110
  15. Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets.
    Cancer Res. 2004 Aug 1;64(15):5245-50 PMID: 15289330
  16. Strong feature sets from small samples.
    J Comput Biol. 2002;9(1):127-46 PMID: 11911798
  17. Suppression of non-small cell lung tumor development by the let-7 microRNA family.
    Proc Natl Acad Sci U S A. 2008 Mar 11;105(10):3903-8 PMID: 18308936
  18. MiR-21 is an EGFR-regulated anti-apoptotic factor in lung cancer in never-smokers.
    Proc Natl Acad Sci U S A. 2009 Jul 21;106(29):12085-90 PMID: 19597153
  19. Common SNP in pre-miR-146a decreases mature miR expression and predisposes to papillary thyroid carcinoma.
    Proc Natl Acad Sci U S A. 2008 May 20;105(20):7269-74 PMID: 18474871
  20. microRNA expression in the prefrontal cortex of individuals with schizophrenia and schizoaffective disorder.
    Genome Biol. 2007;8(2):R27 PMID: 17326821
  21. MicroRNA 92a-2*: a biomarker predictive for chemoresistance and prognostic for survival in patients with small cell lung cancer.
    J Thorac Oncol. 2010 Aug;5(8):1273-8 PMID: 20548249
  22. MicroRNA expression differentiates histology and predicts survival of lung cancer.
    Clin Cancer Res. 2010 Jan 15;16(2):430-41 PMID: 20068076
  23. miR-328 functions as an RNA decoy to modulate hnRNP E2 regulation of mRNA translation in leukemic blasts.
    Cell. 2010 Mar 5;140(5):652-65 PMID: 20211135
  24. Cognitive sequelae of brain radiation in adults.
    Semin Oncol. 2004 Oct;31(5):702-13 PMID: 15497124
  25. Accurate classification of non-small cell lung carcinoma using a novel microRNA-based approach.
    Clin Cancer Res. 2010 Jan 15;16(2):610-9 PMID: 20068099
  26. MicroRNA expression profiles classify human cancers.
    Nature. 2005 Jun 9;435(7043):834-8 PMID: 15944708
  27. Cancer statistics, 2010.
    CA Cancer J Clin. 2010 Sep-Oct;60(5):277-300 PMID: 20610543
  28. Scatter factor promotes motility of human glioma and neuromicrovascular endothelial cells.
    Int J Cancer. 1998 Jan 5;75(1):19-28 PMID: 9426685
  29. Nomogram to predict subsequent brain metastasis in patients with metastatic breast cancer.
    J Clin Oncol. 2010 Apr 20;28(12):2032-7 PMID: 20308667
  30. Genes that mediate breast cancer metastasis to the brain.
    Nature. 2009 Jun 18;459(7249):1005-9 PMID: 19421193
  31. A SNP in a let-7 microRNA complementary site in the KRAS 3' untranslated region increases non-small cell lung cancer risk.
    Cancer Res. 2008 Oct 15;68(20):8535-40 PMID: 18922928
  32. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.
    Methods. 2001 Dec;25(4):402-8 PMID: 11846609
  33. MicroRNA miR-328 regulates zonation morphogenesis by targeting CD44 expression.
    PLoS One. 2008 Jun 18;3(6):e2420 PMID: 18560585
  34. Prophylactic cranial irradiation for patients with lung cancer.
    Clin Lung Cancer. 2007 May;8(6):365-8 PMID: 17562236
  35. Synthetic lethal RNAi screening identifies sensitizing targets for gemcitabine therapy in pancreatic cancer.
    J Transl Med. 2009 Jun 11;7:43 PMID: 19519883
  36. Serum microRNA signatures identified in a genome-wide serum microRNA expression profiling predict survival of non-small-cell lung cancer.
    J Clin Oncol. 2010 Apr 1;28(10):1721-6 PMID: 20194856
  37. Effect of staurosporine on the mobility and invasiveness of lung adenocarcinoma A549 cells: an in vitro study.
    BMC Cancer. 2009 Jun 08;9:174 PMID: 19500428
  38. Efficient large-scale production and concentration of HIV-1-based lentiviral vectors for use in vivo.
    Physiol Genomics. 2003 Feb 06;12(3):221-8 PMID: 12488511
  39. IL-1 beta induces urokinase-plasminogen activator expression and cell migration through PKC alpha, JNK1/2, and NF-kappaB in A549 cells.
    J Cell Physiol. 2009 Apr;219(1):183-93 PMID: 19097143
Article Info
Journal
International journal of cancer
Abbr.
Int J Cancer
ISSN
1097-0215
Published
2011-12-01
Epub
2011-00-29
Pages
2621-31
Language
English
Region
United States
NLM ID
0042124
PMCID
PMC3154499
Subset
IM
Grants
NCI NIH HHS · R01 CA130940 · United States
Howard Hughes Medical Institute · United States
NLM NIH HHS · R21 LM009706-01 · United States
NCI NIH HHS · R01CA130940 · United States
NLM NIH HHS · R21 LM009706 · United States
NLM NIH HHS · R21LM009706-01 · United States
NCI NIH HHS · R01 CA130940-03 · United States
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