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PMID: 20945092 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

A transposon insertion single-gene knockout library and new ordered cosmid library for the model organism Streptomyces coelicolor A3(2).

Antonie van Leeuwenhoek ·Vol. 99 ·No. 3 ·2011-03-00 ·Pages 515-22

Fernández-Martínez LT, Del Sol R, Evans MC, Fielding S, Herron PR, Chandra G, Dyson PJ

Abstract

A simple and high-throughput transposon mediated mutagenesis system employing in vitro shuttle transposon mutagenesis has been used to systematically mutagenise the Streptomyces coelicolor genome. To achieve the highest coverage, a new ordered cosmid library was also constructed. Individual cosmids from both the existing and new libraries were disrupted using the Tn5-based mini-transposon Tn5062. A total of 35,358 insertions were sequenced resulting in the disruption of 6,482 genes (83% of the predicted open reading frames). Complete information for both the newly generated cosmids as well as all the insertions has been uploaded onto a central database, StrepDB ( http://strepdb.streptomyces.org.uk/ ). All insertions, new cosmids and a range of transposon exchange cassettes are available for study of individual gene function.

MeSH Terms
Cosmids/genetics DNA Transposable Elements/genetics Mutagenesis, Insertional/methods Streptomyces coelicolor/genetics
Chemicals
DNA Transposable Elements
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Fernández-Martínez L T
Institute of Life Science, School of Medicine, Swansea University, Singleton Park, Swansea SA2 8PP, UK.
Del Sol R
Evans M C
Fielding S
Herron P R
Chandra G
Dyson P J
Article Info
Journal
Antonie van Leeuwenhoek
Abbr.
Antonie Van Leeuwenhoek
ISSN
1572-9699
Published
2011-03-00
Epub
2010-00-14
Pages
515-22
Language
English
Region
Netherlands
NLM ID
0372625
Subset
IM
Grants
Biotechnology and Biological Sciences Research Council · BB/E019242/1 · United Kingdom
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