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PMID: 20190765 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

A chemical and phosphoproteomic characterization of dasatinib action in lung cancer.

Nature chemical biology ·Vol. 6 ·No. 4 ·2010-04-00 ·Pages 291-9

Li J, Rix U, Fang B, Bai Y, Edwards A, Colinge J, Bennett KL, Gao J, Song L, Eschrich S, Superti-Furga G, Koomen J, Haura EB

Abstract

We describe a strategy for comprehending signaling pathways that are active in lung cancer cells and that are targeted by dasatinib using chemical proteomics to identify direct interacting proteins combined with immunoaffinity purification of tyrosine-phosphorylated peptides corresponding to activated tyrosine kinases. We identified nearly 40 different kinase targets of dasatinib. These include SRC-family kinase (SFK) members (LYN, SRC, FYN, LCK and YES), nonreceptor tyrosine kinases (FRK, BRK and ACK) and receptor tyrosine kinases (Ephrin receptors, DDR1 and EGFR). Using quantitative phosphoproteomics, we identified peptides corresponding to autophosphorylation sites of these tyrosine kinases that are inhibited in a concentration-dependent manner by dasatinib. Using drug-resistant gatekeeper mutants, we show that SFKs (particularly SRC and FYN), as well as EGFR, are relevant targets for dasatinib action. The combined mass spectrometry-based approach described here provides a system-level view of dasatinib action in cancer cells and suggests both functional targets and a rationale for combinatorial therapeutic strategies.

MeSH Terms
Apoptosis Cell Line, Tumor Dasatinib Gene Knockdown Techniques Humans Lung Neoplasms/drug therapy,metabolism,pathology Mass Spectrometry Peptides/chemistry,metabolism Phenotype Phosphoproteins/chemistry,metabolism Phosphorylation/drug effects Protein Binding Protein Serine-Threonine Kinases/metabolism Protein-Tyrosine Kinases/antagonists & inhibitors,metabolism Proteomics/methods Pyrimidines/metabolism,pharmacology,therapeutic use Signal Transduction/drug effects Thiazoles/metabolism,pharmacology,therapeutic use
Chemicals
Peptides Phosphoproteins Pyrimidines Thiazoles Protein-Tyrosine Kinases Protein Serine-Threonine Kinases Dasatinib
Authors & Affiliations
13 authors, click to expand affiliations / ORCID
Li Jiannong
Department of Thoracic Oncology Program, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida, USA.
Rix Uwe
Fang Bin
Bai Yun
Edwards Arthur
Colinge Jacques
Bennett Keiryn L
Gao Jingchun
Song Lanxi
Eschrich Steven
Superti-Furga Giulio
Koomen John
Haura Eric B
References (50)
50 references, click to expand
  1. Global target profile of the kinase inhibitor bosutinib in primary chronic myeloid leukemia cells.
    Leukemia. 2009 Mar;23(3):477-85 PMID: 19039322
  2. Metastatic properties and genomic amplification of the tyrosine kinase gene ACK1.
    Proc Natl Acad Sci U S A. 2005 Nov 1;102(44):15901-6 PMID: 16247015
  3. Biochemical properties of the Cdc42-associated tyrosine kinase ACK1. Substrate specificity, authphosphorylation, and interaction with Hck.
    J Biol Chem. 2003 Nov 28;278(48):47713-23 PMID: 14506255
  4. Transient potent BCR-ABL inhibition is sufficient to commit chronic myeloid leukemia cells irreversibly to apoptosis.
    Cancer Cell. 2008 Dec 9;14(6):485-93 PMID: 19061839
  5. Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer.
    Cell. 2007 Dec 14;131(6):1190-203 PMID: 18083107
  6. SRC family kinases mediate epidermal growth factor receptor ligand cleavage, proliferation, and invasion of head and neck cancer cells.
    Cancer Res. 2004 Sep 1;64(17):6166-73 PMID: 15342401
  7. The hunting of the Src.
    Nat Rev Mol Cell Biol. 2001 Jun;2(6):467-75 PMID: 11389470
  8. Met and c-Src cooperate to compensate for loss of epidermal growth factor receptor kinase activity in breast cancer cells.
    Cancer Res. 2008 May 1;68(9):3314-22 PMID: 18451158
  9. Quantitative chemical proteomics reveals mechanisms of action of clinical ABL kinase inhibitors.
    Nat Biotechnol. 2007 Sep;25(9):1035-44 PMID: 17721511
  10. A renaissance for SRC.
    Nat Rev Cancer. 2004 Jun;4(6):470-80 PMID: 15170449
  11. Akt/protein kinase B signaling inhibitor-2, a selective small molecule inhibitor of Akt signaling with antitumor activity in cancer cells overexpressing Akt.
    Cancer Res. 2004 Jul 1;64(13):4394-9 PMID: 15231645
  12. A selective small molecule inhibitor of c-Met, PHA665752, inhibits tumorigenicity and angiogenesis in mouse lung cancer xenografts.
    Cancer Res. 2007 Apr 15;67(8):3529-34 PMID: 17440059
  13. Potentiation of epidermal growth factor receptor-mediated oncogenesis by c-Src: implications for the etiology of multiple human cancers.
    Proc Natl Acad Sci U S A. 1995 Jul 18;92(15):6981-5 PMID: 7542783
  14. A small molecule-kinase interaction map for clinical kinase inhibitors.
    Nat Biotechnol. 2005 Mar;23(3):329-36 PMID: 15711537
  15. ILK, PINCH and parvin: the tIPP of integrin signalling.
    Nat Rev Mol Cell Biol. 2006 Jan;7(1):20-31 PMID: 16493410
  16. Chemical proteomic profiles of the BCR-ABL inhibitors imatinib, nilotinib, and dasatinib reveal novel kinase and nonkinase targets.
    Blood. 2007 Dec 1;110(12):4055-63 PMID: 17720881
  17. Requirement of activated Cdc42-associated kinase for survival of v-Ras-transformed mammalian cells.
    Mol Cancer Res. 2005 May;3(5):297-305 PMID: 15886301
  18. Dasatinib (BMS-354825) selectively induces apoptosis in lung cancer cells dependent on epidermal growth factor receptor signaling for survival.
    Cancer Res. 2006 Jun 1;66(11):5542-8 PMID: 16740687
  19. Oncogenic kinase signalling.
    Nature. 2001 May 17;411(6835):355-65 PMID: 11357143
  20. Expression of the BRK tyrosine kinase in mammary epithelial cells enhances the coupling of EGF signalling to PI 3-kinase and Akt, via erbB3 phosphorylation.
    Oncogene. 2000 Nov 16;19(48):5471-6 PMID: 11114724
  21. Target profiling of small molecules by chemical proteomics.
    Nat Chem Biol. 2009 Sep;5(9):616-24 PMID: 19690537
  22. Epidermal-growth-factor-dependent activation of the src-family kinases.
    Eur J Biochem. 1994 Nov 1;225(3):1047-53 PMID: 7525285
  23. EGF receptor gene mutations are common in lung cancers from "never smokers" and are associated with sensitivity of tumors to gefitinib and erlotinib.
    Proc Natl Acad Sci U S A. 2004 Sep 7;101(36):13306-11 PMID: 15329413
  24. Bead-based profiling of tyrosine kinase phosphorylation identifies SRC as a potential target for glioblastoma therapy.
    Nat Biotechnol. 2009 Jan;27(1):77-83 PMID: 19098899
  25. Expression and mutation analysis of the discoidin domain receptors 1 and 2 in non-small cell lung carcinoma.
    Br J Cancer. 2007 Mar 12;96(5):808-14 PMID: 17299390
  26. Breast tumor kinase (protein tyrosine kinase 6) regulates heregulin-induced activation of ERK5 and p38 MAP kinases in breast cancer cells.
    Cancer Res. 2007 May 1;67(9):4199-209 PMID: 17483331
  27. Inhibition of pulmonary and skeletal metastasis by a transforming growth factor-beta type I receptor kinase inhibitor.
    Cancer Res. 2006 Jul 1;66(13):6714-21 PMID: 16818646
  28. The Btk tyrosine kinase is a major target of the Bcr-Abl inhibitor dasatinib.
    Proc Natl Acad Sci U S A. 2007 Aug 14;104(33):13283-8 PMID: 17684099
  29. Development of human protein reference database as an initial platform for approaching systems biology in humans.
    Genome Res. 2003 Oct;13(10):2363-71 PMID: 14525934
  30. Eph receptor and ephrin ligand-mediated interactions during angiogenesis and tumor progression.
    Exp Cell Res. 2006 Mar 10;312(5):642-50 PMID: 16330025
  31. Src phosphorylation of the epidermal growth factor receptor at novel sites mediates receptor interaction with Src and P85 alpha.
    J Biol Chem. 1995 Jun 30;270(26):15591-7 PMID: 7797556
  32. c-Src and cooperating partners in human cancer.
    Cancer Cell. 2004 Sep;6(3):209-14 PMID: 15380511
  33. Activated Cdc42-associated kinase 1 is a component of EGF receptor signaling complex and regulates EGF receptor degradation.
    Mol Biol Cell. 2007 Mar;18(3):732-42 PMID: 17182860
  34. Increased expression of integrin-linked kinase is associated with shorter survival in non-small cell lung cancer.
    BMC Cancer. 2005 Jan 05;5:1 PMID: 15631637
  35. Mechanism of biological synergy between cellular Src and epidermal growth factor receptor.
    Proc Natl Acad Sci U S A. 1999 Feb 16;96(4):1415-20 PMID: 9990038
  36. A quantitative analysis of kinase inhibitor selectivity.
    Nat Biotechnol. 2008 Jan;26(1):127-32 PMID: 18183025
  37. SRC-family kinases are activated in non-small cell lung cancer and promote the survival of epidermal growth factor receptor-dependent cell lines.
    Am J Pathol. 2007 Jan;170(1):366-76 PMID: 17200208
  38. EGFR mutations in lung cancer: correlation with clinical response to gefitinib therapy.
    Science. 2004 Jun 4;304(5676):1497-500 PMID: 15118125
  39. Tyrosine phosphorylation of ACK in response to temperature shift-down, hyperosmotic shock, and epidermal growth factor stimulation.
    FEBS Lett. 1996 May 20;386(2-3):230-4 PMID: 8647288
  40. Identification of genotype-correlated sensitivity to selective kinase inhibitors by using high-throughput tumor cell line profiling.
    Proc Natl Acad Sci U S A. 2007 Dec 11;104(50):19936-41 PMID: 18077425
  41. High-efficiency expression/cloning of epidermal growth factor-receptor-binding proteins with Src homology 2 domains.
    Proc Natl Acad Sci U S A. 1992 Oct 1;89(19):8894-8 PMID: 1409582
  42. Transcriptional profiling identifies cyclin D1 as a critical downstream effector of mutant epidermal growth factor receptor signaling.
    Cancer Res. 2006 Dec 1;66(23):11389-98 PMID: 17145885
  43. A kinase-negative epidermal growth factor receptor that retains the capacity to stimulate DNA synthesis.
    Proc Natl Acad Sci U S A. 1994 Jul 19;91(15):6967-71 PMID: 8041731
  44. EGFR mutants found in non-small cell lung cancer show different levels of sensitivity to suppression of Src: implications in targeting therapy.
    Oncogene. 2008 Feb 7;27(7):957-65 PMID: 17653080
  45. The nonreceptor tyrosine kinase ACK2, a specific target for Cdc42 and a negative regulator of cell growth and focal adhesion complexes.
    J Biol Chem. 2001 Nov 23;276(47):43987-93 PMID: 11535592
  46. Acquired resistance of lung adenocarcinomas to gefitinib or erlotinib is associated with a second mutation in the EGFR kinase domain.
    PLoS Med. 2005 Mar;2(3):e73 PMID: 15737014
  47. Activating mutations in the epidermal growth factor receptor underlying responsiveness of non-small-cell lung cancer to gefitinib.
    N Engl J Med. 2004 May 20;350(21):2129-39 PMID: 15118073
  48. Alterations in genes of the EGFR signaling pathway and their relationship to EGFR tyrosine kinase inhibitor sensitivity in lung cancer cell lines.
    PLoS One. 2009;4(2):e4576 PMID: 19238210
  49. Src kinases as therapeutic targets for cancer.
    Nat Rev Clin Oncol. 2009 Oct;6(10):587-95 PMID: 19787002
  50. Targeting SRC family kinases inhibits growth and lymph node metastases of prostate cancer in an orthotopic nude mouse model.
    Cancer Res. 2008 May 1;68(9):3323-33 PMID: 18451159
Article Info
Journal
Nature chemical biology
Abbr.
Nat Chem Biol
ISSN
1552-4469
Published
2010-04-00
Epub
2010-00-28
Pages
291-9
Language
English
Region
United States
NLM ID
101231976
PMCID
PMC2842457
Subset
IM
Grants
NCI NIH HHS · P50 CA119997 · United States
NCI NIH HHS · R01 CA123174 · United States
NCI NIH HHS · R01 CA123174-02 · United States
Databases
PubChem-Substance
87357382
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