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PMID: 20008064 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Complete genome sequence of the wild-type commensal Escherichia coli strain SE15, belonging to phylogenetic group B2.

Journal of bacteriology ·Vol. 192 ·No. 4 ·2010-02-00 ·Pages 1165-6

Toh H, Oshima K, Toyoda A, Ogura Y, Ooka T, Sasamoto H, Park SH, Iyoda S, Kurokawa K, Morita H, Itoh K, Taylor TD, Hayashi T, Hattori M

Abstract

Escherichia coli SE15 (O150:H5) is a human commensal bacterium recently isolated from feces of a healthy adult and classified into E. coli phylogenetic group B2, which includes the majority of extraintestinal pathogenic E. coli. Here, we report the finished and annotated genome sequence of this organism.

MeSH Terms
Adult Bacterial Typing Techniques DNA, Bacterial/chemistry,genetics Escherichia coli/classification,genetics,isolation & purification Feces/microbiology Genome, Bacterial Genotype Humans Molecular Sequence Data Sequence Analysis, DNA Young Adult
Chemicals
DNA, Bacterial
Authors & Affiliations
14 authors, click to expand affiliations / ORCID
Toh Hidehiro
Advanced Science Institute, RIKEN, Yokohama, Kanagawa, Japan.
Oshima Kenshiro
Toyoda Atsushi
Ogura Yoshitoshi
Ooka Tadasuke
Sasamoto Hiroyuki
Park Sang-Hee
Iyoda Sunao
Kurokawa Ken
Morita Hidetoshi
Itoh Kikuji
Taylor Todd D
Hayashi Tetsuya
Hattori Masahira
References (9)
9 references, click to expand
  1. Pathogenic adaptation of Escherichia coli by natural variation of the FimH adhesin.
    Proc Natl Acad Sci U S A. 1998 Jul 21;95(15):8922-6 PMID: 9671780
  2. Extraintestinal virulence is a coincidental by-product of commensalism in B2 phylogenetic group Escherichia coli strains.
    Mol Biol Evol. 2007 Nov;24(11):2373-84 PMID: 17709333
  3. Automated finishing with autofinish.
    Genome Res. 2001 Apr;11(4):614-25 PMID: 11282977
  4. Biosynthesis and assembly of capsular polysaccharides in Escherichia coli.
    Annu Rev Biochem. 2006;75:39-68 PMID: 16756484
  5. Genome sequencing in microfabricated high-density picolitre reactors.
    Nature. 2005 Sep 15;437(7057):376-80 PMID: 16056220
  6. Defining genomic islands and uropathogen-specific genes in uropathogenic Escherichia coli.
    J Bacteriol. 2007 May;189(9):3532-46 PMID: 17351047
  7. Complete genome sequence and comparative analysis of the wild-type commensal Escherichia coli strain SE11 isolated from a healthy adult.
    DNA Res. 2008 Dec;15(6):375-86 PMID: 18931093
  8. Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths.
    PLoS Genet. 2009 Jan;5(1):e1000344 PMID: 19165319
  9. Escherichia coli induces DNA double-strand breaks in eukaryotic cells.
    Science. 2006 Aug 11;313(5788):848-51 PMID: 16902142
Article Info
Journal
Journal of bacteriology
Abbr.
J Bacteriol
ISSN
1098-5530
DOI
10.1128/JB.01543-09
Published
2010-02-00
Epub
2009-00-11
Pages
1165-6
Language
English
Region
United States
NLM ID
2985120R
PMCID
PMC2812965
Subset
IM
Databases
GENBANK
AP009378, AP009379
External Links
PubMed source DOI: 10.1128/JB.01543-09 PMC Full Text View journal details
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