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PMID: 19796334 Published · ppublish English Comment Journal Article

Fungal ecology catches fire.

The New phytologist ·Vol. 184 ·No. 2 ·2009-10-00 ·Pages 279-282

Hibbett DS, Ohman A, Kirk PM

Abstract

暂无摘要

MeSH Terms
Base Sequence Biodiversity Ecology/methods Fungi/classification,genetics Genes, Fungal RNA, Fungal Sequence Analysis, DNA/methods Species Specificity
Chemicals
RNA, Fungal
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Hibbett David S
Biology Department, Clark University, Worcester, MA 01610, USA.
Ohman Anders
Biology Department, Clark University, Worcester, MA 01610, USA.
Kirk Paul M
CABI UK, Bakeham Lane, Egham, Surrey TW20 9TY, UK.
References (14)
14 references, click to expand
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  2. Buée M, Reich M, Murat C, Morin E, Nilsson RH, Uroz S, Martin F. 2009. 454 pyrosequencing analyses of forest soils reveal an unexpected high fungal diversity. New Phytologist 184: 449-456.
  3. Hawksworth DL. 1991. The fungal dimension of biodiversity: magnitude, significance, and conservation. Mycological Research 95: 641-655.
  4. Hawksworth DL. 2001. The magnitude of fungal diversity: the 1.5 million species estimate revisited. Mycological Research 105: 1422-1432.
  5. Huson DH, Auch AF, Qi J, Schuster SC. 2007. MEGAN analysis of metagenomic data. Genome Research 17: 377-386.
  6. Jumpponen A, Jones KL. 2009. Massively parallel 454-sequencing indicates hyperdiverse fungal communities in temperate Quercus macrocarpa phyllosphere. New Phytologist 184: 438-448.
  7. Kirk PM, Cannon PF, Minter DW, Stalpers JA. 2008. Dictionary of the Fungi, 10th ed. Wallingford, UK: CABI.
  8. Kõljalg U, Larsson K-H, Abarenkov K, Nilsson RH, Alexander IJ, Eberhardt U, Erland S, Hoiland K, Kjoller R, Larsson E et al. 2005. UNITE: a database providing web-based methods for the molecular identification of ectomycorrhizal fungi. New Phytologist 166: 1063-1068.
  9. McNeill J, Barrie FR, Burdet HM, Demoulin V, Hawksworth DL, Marhold K, Nicolson DH, Prado J, Silva PC, Skog JE et al. 2006. International Code of Botanical Nomenclature (Vienna Code) adopted by the Seventeenth International Botanical Congress Vienna, Austria, July 2005. Ruggell, Liechtenstein: Gantner Verlag.
  10. Nilsson RH, Ryberg M, Kristianssin E, Abarenkov K, Larsson KH. 2006. Taxonomic reliability of DNA sequences in public sequence databases: a fungal perspective. PLoS ONE 1: e59.
  11. O’Brien HE, Parrent JL, Jackson JA, Moncalvo JM, Vilgalys R. 2005. Fungal community analysis by large-scale sequencing of environmental samples. Applied and Environmental Microbiology 71: 5544-5550.
  12. Öpik M, Metsis M, Daniell TJ, Zobel M, Moora M. 2009. Large-scale parallel 454 sequencing reveals host ecological group specificity of arbuscular mycorrhizal fungi in a boreonemoral forest. New Phytologist 184: 424-437.
  13. Seifert KA. 2008. Integrating DNA barcoding into the mycological sciences. Persoonia 21: 162-166.
  14. Seifert KA, Samson RA, DeWaard JR, Houbraken J, Lévesque CA, Moncalvo JM, Louis-Seize G, Hebert PDN. 2007. Prospects for fungus identification using CO1 DNA barcodes, with Penicillium as a test case. Proceedings of the National Academy of Sciences, USA 104: 3901-3906.
Article Info
Journal
The New phytologist
Abbr.
New Phytol
ISSN
1469-8137
Published
2009-10-00
Pages
279-282
Language
English
Region
England
NLM ID
9882884
Subset
IM
Corrections
CommentOn
CommentOn
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