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PMID: 19749029 Published · ppublish English Journal Article

Succinatimonas hippei gen. nov., sp. nov., isolated from human faeces.

International journal of systematic and evolutionary microbiology ·Vol. 60 ·No. Pt 8 ·2010-08-00 ·Pages 1788-1793

Morotomi M, Nagai F, Watanabe Y, Tanaka R

Abstract

A novel strictly anaerobic, non-spore-forming, non-motile, non-flagellated, rod-shaped, Gram-negative bacterium (YIT 12066T) was isolated from human faeces. The isolate was negative for catalase, oxidase, urease, hydrolysis of aesculin and gelatin, nitrate reduction and indole production. The major end products of glucose metabolism were succinate and acetate. The major cellular fatty acids (>10%) were C14:0, C18:1omega7c, C18:1omega9c, C16:1omega7c and C16:0. The G+C content of the DNA was 40.3 mol%. 16S rRNA gene sequence analysis showed that strain YIT 12066T was most closely related to members of the family Succinivibrionaceae, with sequence similarity of 92-87%. However, some phenotypic characteristics such as cellular morphology and the major fatty acid profile of strain YIT 12066T were markedly different from those of other members of the family Succinivibrionaceae. On the basis of both phylogenetic and phenotypic evidence, it is suggested that strain YIT 12066T represents a novel species in a new genus, for which the name Succinatimonas hippei gen. nov., sp. nov. is proposed; the type strain of Succinatimonas hippei is YIT 12066T (=DSM 22608T =JCM 16073T).

MeSH Terms
DNA, Bacterial/genetics DNA, Ribosomal/genetics Fatty Acids/metabolism Feces/microbiology Gammaproteobacteria/classification,genetics,isolation & purification,metabolism Humans Molecular Sequence Data Phylogeny RNA, Ribosomal, 16S/genetics
Chemicals
DNA, Bacterial DNA, Ribosomal Fatty Acids RNA, Ribosomal, 16S
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Morotomi Masami
Yakult Central Institute for Microbiological Research, 1796 Yaho, Kunitachi, 186-8650 Tokyo, Japan.
Nagai Fumiko
Yakult Central Institute for Microbiological Research, 1796 Yaho, Kunitachi, 186-8650 Tokyo, Japan.
Watanabe Yohei
Yakult Central Institute for Microbiological Research, 1796 Yaho, Kunitachi, 186-8650 Tokyo, Japan.
Tanaka Ryuichiro
Yakult Central Institute for Microbiological Research, 1796 Yaho, Kunitachi, 186-8650 Tokyo, Japan.
Article Info
Journal
International journal of systematic and evolutionary microbiology
Abbr.
Int J Syst Evol Microbiol
ISSN
1466-5026
Published
2010-08-00
Epub
2009-00-11
Pages
1788-1793
Language
English
Region
England
NLM ID
100899600
Subset
IM
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