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PMID: 19508698 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Review

Exploration of hitherto-uncultured bacteria from the rhizosphere.

FEMS microbiology ecology ·Vol. 69 ·No. 3 ·2009-09-00 ·Pages 313-28

da Rocha UN, van Overbeek L, van Elsas JD

Abstract

The rhizosphere environment selects a particular microbial community that arises from the one present in bulk soil due to the release of particular compounds in exudates and different opportunities for microbial colonization. During plant-microorganism coevolution, microbial functions supporting plant health and productivity have developed, of which most are described in cultured plant-associated bacteria. This review discusses the state of the art concerning the ecology of the hitherto-uncultured bacteria of the rhizosphere environment, focusing on Acidobacteria, Verrucomicrobia and Planctomycetes. Furthermore, a strategy is proposed to recover bacterial isolates from these taxa from the rhizosphere environment.

MeSH Terms
Bacteria/classification,genetics DNA, Bacterial/genetics Ecosystem Plants/microbiology RNA, Ribosomal, 16S/genetics Soil Soil Microbiology
Chemicals
DNA, Bacterial RNA, Ribosomal, 16S Soil
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
da Rocha Ulisses Nunes
Wageningen University and Research Centre, Plant Sciences Group, 6708PB Wageningen, The Netherlands.
van Overbeek Leo
van Elsas Jan Dirk
Article Info
Journal
FEMS microbiology ecology
Abbr.
FEMS Microbiol Ecol
ISSN
1574-6941
Published
2009-09-00
Epub
2009-00-06
Pages
313-28
Language
English
Region
England
NLM ID
8901229
Subset
IM
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