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PMID: 19211563 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Differential clathrin binding and subcellular localization of OCRL1 splice isoforms.

The Journal of biological chemistry ·Vol. 284 ·No. 15 ·2009-04-10 ·Pages 9965-73

Choudhury R, Noakes CJ, McKenzie E, Kox C, Lowe M

Abstract

Mutation of the inositol polyphosphate 5-phosphatase OCRL1 causes the X-linked disorder oculocerebrorenal syndrome of Lowe, characterized by defects in the brain, kidneys, and eyes. OCRL1 exists as two splice isoforms that differ by a single exon encoding 8 amino acids. The longer protein, termed isoform a, is the only form in brain, whereas both isoforms are present in all other tissues. The significance of OCRL1 splicing is currently unclear. Given its proximity to a clathrin-binding site, we hypothesized that splicing may alter the clathrin binding properties of OCRL1. Here we show that this is indeed the case. OCRL1 isoform a binds clathrin with higher affinity than isoform b and is significantly more enriched in clathrin-coated trafficking intermediates. We also identify a second clathrin-binding site in OCRL1 that contributes to clathrin binding of both isoforms. Association of OCRL1 with clathrin-coated intermediates requires membrane association through interaction with Rab GTPases but not binding to the clathrin adaptor AP2. Expression of OCRL1 isoform a lacking the 5-phosphatase domain impairs transferrin endocytosis, whereas an equivalent version of isoform b does not. Our results suggest that OCRL1 exists as two functional pools, one participating in clathrin-mediated trafficking events such as endocytosis and another that is much less or not involved in this process.

MeSH Terms
Alternative Splicing Animals Cell Line Clathrin/chemistry Endocytosis HeLa Cells Humans Microscopy, Fluorescence Mutation Phosphoric Monoester Hydrolases/genetics,physiology Protein Binding Protein Isoforms Rats Subcellular Fractions/metabolism rab GTP-Binding Proteins/metabolism
Chemicals
Clathrin Protein Isoforms Phosphoric Monoester Hydrolases OCRL protein, human rab GTP-Binding Proteins
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Choudhury Rawshan
Faculty of Life Sciences, University of Manchester, The Michael Smith Building, Oxford Road, Manchester M13 9PT, United Kingdom.
Noakes Christopher J
McKenzie Edward
Kox Corinne
Lowe Martin
References (28)
28 references, click to expand
  1. EpsinR is an adaptor for the SNARE protein Vti1b.
    Mol Biol Cell. 2004 Dec;15(12):5593-602 PMID: 15371541
  2. All known patient mutations in the ASH-RhoGAP domains of OCRL affect targeting and APPL1 binding.
    Biochem Biophys Res Commun. 2008 May 2;369(2):493-9 PMID: 18307981
  3. Physical mapping and genomic structure of the Lowe syndrome gene OCRL1.
    Hum Genet. 1997 Feb;99(2):145-50 PMID: 9048911
  4. Properties of type II inositol polyphosphate 5-phosphatase.
    J Biol Chem. 1995 Apr 21;270(16):9370-7 PMID: 7721860
  5. Peptide-in-groove interactions link target proteins to the beta-propeller of clathrin.
    Proc Natl Acad Sci U S A. 2000 Feb 1;97(3):1096-100 PMID: 10655490
  6. Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays.
    Science. 2003 Dec 19;302(5653):2141-4 PMID: 14684825
  7. Lowe syndrome protein Ocrl1 is translocated to membrane ruffles upon Rac GTPase activation: a new perspective on Lowe syndrome pathophysiology.
    Hum Mol Genet. 2005 Jun 1;14(11):1441-8 PMID: 15829501
  8. The endosomal protein Appl1 mediates Akt substrate specificity and cell survival in vertebrate development.
    Cell. 2008 May 2;133(3):486-97 PMID: 18455989
  9. The deficiency of PIP2 5-phosphatase in Lowe syndrome affects actin polymerization.
    Am J Hum Genet. 2002 Dec;71(6):1420-7 PMID: 12428211
  10. The inositol polyphosphate 5-phosphatase Ocrl associates with endosomes that are partially coated with clathrin.
    Proc Natl Acad Sci U S A. 2004 Sep 14;101(37):13501-6 PMID: 15353600
  11. Bilayered clathrin coats on endosomal vacuoles are involved in protein sorting toward lysosomes.
    Mol Biol Cell. 2002 Apr;13(4):1313-28 PMID: 11950941
  12. The tyrosine kinase ACK1 associates with clathrin-coated vesicles through a binding motif shared by arrestin and other adaptors.
    J Biol Chem. 2001 May 25;276(21):18392-8 PMID: 11278436
  13. Structure and function of the Lowe syndrome protein OCRL1.
    Traffic. 2005 Sep;6(9):711-9 PMID: 16101675
  14. Membrane targeting and activation of the Lowe syndrome protein OCRL1 by rab GTPases.
    EMBO J. 2006 Aug 23;25(16):3750-61 PMID: 16902405
  15. Organic-aciduria, decreased renal ammonia production, hydrophthalmos, and mental retardation; a clinical entity.
    AMA Am J Dis Child. 1952 Feb;83(2):164-84 PMID: 14884753
  16. Lowe syndrome protein OCRL1 interacts with clathrin and regulates protein trafficking between endosomes and the trans-Golgi network.
    Mol Biol Cell. 2005 Aug;16(8):3467-79 PMID: 15917292
  17. The coiled-coil membrane protein golgin-84 is a novel rab effector required for Golgi ribbon formation.
    J Cell Biol. 2003 Jan 20;160(2):201-12 PMID: 12538640
  18. GIPC is recruited by APPL to peripheral TrkA endosomes and regulates TrkA trafficking and signaling.
    Mol Cell Biol. 2006 Dec;26(23):8942-52 PMID: 17015470
  19. Epsin binds to clathrin by associating directly with the clathrin-terminal domain. Evidence for cooperative binding through two discrete sites.
    J Biol Chem. 2000 Mar 3;275(9):6479-89 PMID: 10692452
  20. The effect of missense mutations in the RhoGAP-homology domain on ocrl1 function.
    Mol Genet Metab. 2006 Sep-Oct;89(1-2):121-8 PMID: 16777452
  21. The oculocerebrorenal syndrome gene product is a 105-kD protein localized to the Golgi complex.
    Am J Hum Genet. 1995 Oct;57(4):817-23 PMID: 7573041
  22. An enzymatic cascade of Rab5 effectors regulates phosphoinositide turnover in the endocytic pathway.
    J Cell Biol. 2005 Aug 15;170(4):607-18 PMID: 16103228
  23. Type II phosphoinositide 5-phosphatases have unique sensitivities towards fatty acid composition and head group phosphorylation.
    FEBS Lett. 2004 Oct 8;576(1-2):9-13 PMID: 15474001
  24. A role of the Lowe syndrome protein OCRL in early steps of the endocytic pathway.
    Dev Cell. 2007 Sep;13(3):377-90 PMID: 17765681
  25. Lowe syndrome protein OCRL1 interacts with Rac GTPase in the trans-Golgi network.
    Hum Mol Genet. 2003 Oct 1;12(19):2449-56 PMID: 12915445
  26. Agonist-induced endocytosis of CC chemokine receptor 5 is clathrin dependent.
    Mol Biol Cell. 2005 Feb;16(2):902-17 PMID: 15591129
  27. Functional overlap between murine Inpp5b and Ocrl1 may explain why deficiency of the murine ortholog for OCRL1 does not cause Lowe syndrome in mice.
    J Clin Invest. 1998 May 15;101(10):2042-53 PMID: 9593760
  28. Targeting of the type II inositol polyphosphate 5-phosphatase INPP5B to the early secretory pathway.
    J Cell Sci. 2007 Nov 15;120(Pt 22):3941-51 PMID: 17956944
Article Info
Journal
The Journal of biological chemistry
Abbr.
J Biol Chem
ISSN
0021-9258
Published
2009-04-10
Epub
2009-00-11
Pages
9965-73
Language
English
Region
United States
NLM ID
2985121R
PMCID
PMC2665120
Subset
IM
Grants
Biotechnology and Biological Sciences Research Council · C17842 · United Kingdom
Medical Research Council · G117/494 · United Kingdom
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