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PMID: 19188186 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Genetic variants and family history predict prostate cancer similar to prostate-specific antigen.

Zheng SL, Sun J, Wiklund F, Gao Z, Stattin P, Purcell LD, Adami HO, Hsu FC, Zhu Y, Adolfsson J, Johansson JE, Turner AR, Adams TS, Liu W, Duggan D, Carpten JD, Chang BL, Isaacs WB, Xu J, Grönberg H

Abstract

Although prostate-specific antigen (PSA) is the best biomarker for predicting prostate cancer, its predictive performance needs to be improved. Results from the Prostate Cancer Prevention Trial revealed the overall performance measured by the areas under curve of the receiver operating characteristic at 0.68. The goal of the present study is to assess the ability of genetic variants as a PSA-independent method to predict prostate cancer risk. We systematically evaluated all prostate cancer risk variants that were identified from genome-wide association studies during the past year in a large population-based prostate cancer case-control study population in Sweden, including 2,893 prostate cancer patients and 1,781 men without prostate cancer. Twelve single nucleotide polymorphisms were independently associated with prostate cancer risk in this Swedish study population. Using a cutoff of any 11 risk alleles or family history, the sensitivity and specificity for predicting prostate cancer were 0.25 and 0.86, respectively. The overall predictive performance of prostate cancer using genetic variants, family history, and age, measured by areas under curve was 0.65 (95% confidence interval, 0.63-0.66), significantly improved over that of family history and age (0.61%; 95% confidence interval, 0.59-0.62; P = 2.3 x 10(-10)). The predictive performance for prostate cancer using genetic variants and family history is similar to that of PSA. The utility of genetic testing, alone and in combination with PSA levels, should be evaluated in large studies such as the European Randomized Study for Prostate Cancer trial and Prostate Cancer Prevention Trial.

MeSH Terms
Aged Area Under Curve Biomarkers, Tumor/analysis Case-Control Studies Family Health Genome-Wide Association Study Humans Male Polymorphism, Single Nucleotide Predictive Value of Tests Prostate-Specific Antigen/analysis Prostatic Neoplasms/genetics ROC Curve Risk Factors Sensitivity and Specificity
Chemicals
Biomarkers, Tumor Prostate-Specific Antigen
Authors & Affiliations
20 authors, click to expand affiliations / ORCID
Zheng S Lilly
Center for Cancer Genomics, Wake Forest University School of Medicine, Winston-Salem, North Carolina, USA.
Sun Jielin
Wiklund Fredrik
Gao Zhengrong
Stattin Pär
Purcell Lina D
Adami Hans-Olov
Hsu Fang-Chi
Zhu Yi
Adolfsson Jan
Johansson Jan-Erik
Turner Aubrey R
Adams Tamara S
Liu Wennuan
Duggan David
Carpten John D
Chang Bao-Li
Isaacs William B
Xu Jianfeng
Grönberg Henrik
References (28)
28 references, click to expand
  1. The common variant rs1447295 on chromosome 8q24 and prostate cancer risk: results from an Australian population-based case-control study.
    Cancer Epidemiol Biomarkers Prev. 2007 Mar;16(3):610-2 PMID: 17372260
  2. uPM3, a new molecular urine test for the detection of prostate cancer.
    Urology. 2004 Aug;64(2):311-5; discussion 315-6 PMID: 15302485
  3. A common 8q24 variant in prostate and breast cancer from a large nested case-control study.
    Cancer Res. 2007 Apr 1;67(7):2951-6 PMID: 17409400
  4. Confirmation study of prostate cancer risk variants at 8q24 in African Americans identifies a novel risk locus.
    Genome Res. 2007 Dec;17(12):1717-22 PMID: 17978284
  5. Two variants on chromosome 17 confer prostate cancer risk, and the one in TCF2 protects against type 2 diabetes.
    Nat Genet. 2007 Aug;39(8):977-83 PMID: 17603485
  6. Confirmation of a positive association between prostate cancer risk and a locus at chromosome 8q24.
    Cancer Epidemiol Biomarkers Prev. 2007 Apr;16(4):809-14 PMID: 17416775
  7. Annual report to the nation on the status of cancer, 1975-2000, featuring the uses of surveillance data for cancer prevention and control.
    J Natl Cancer Inst. 2003 Sep 3;95(17):1276-99 PMID: 12953083
  8. Admixture mapping identifies 8q24 as a prostate cancer risk locus in African-American men.
    Proc Natl Acad Sci U S A. 2006 Sep 19;103(38):14068-73 PMID: 16945910
  9. Longitudinal evaluation of prostate-specific antigen levels in men with and without prostate disease.
    JAMA. 1992 Apr 22-29;267(16):2215-20 PMID: 1372942
  10. Comparing the areas under two or more correlated receiver operating characteristic curves: a nonparametric approach.
    Biometrics. 1988 Sep;44(3):837-45 PMID: 3203132
  11. A common variant associated with prostate cancer in European and African populations.
    Nat Genet. 2006 Jun;38(6):652-8 PMID: 16682969
  12. Use of the percentage of free prostate-specific antigen to enhance differentiation of prostate cancer from benign prostatic disease: a prospective multicenter clinical trial.
    JAMA. 1998 May 20;279(19):1542-7 PMID: 9605898
  13. Multiple regions within 8q24 independently affect risk for prostate cancer.
    Nat Genet. 2007 May;39(5):638-44 PMID: 17401364
  14. Two common chromosome 8q24 variants are associated with increased risk for prostate cancer.
    Cancer Res. 2007 Apr 1;67(7):2944-50 PMID: 17409399
  15. Genome-wide association study identifies a second prostate cancer susceptibility variant at 8q24.
    Nat Genet. 2007 May;39(5):631-7 PMID: 17401366
  16. Multiple loci identified in a genome-wide association study of prostate cancer.
    Nat Genet. 2008 Mar;40(3):310-5 PMID: 18264096
  17. Two genome-wide association studies of aggressive prostate cancer implicate putative prostate tumor suppressor gene DAB2IP.
    J Natl Cancer Inst. 2007 Dec 19;99(24):1836-44 PMID: 18073375
  18. Association between two unlinked loci at 8q24 and prostate cancer risk among European Americans.
    J Natl Cancer Inst. 2007 Oct 17;99(20):1525-33 PMID: 17925536
  19. Cumulative association of five genetic variants with prostate cancer.
    N Engl J Med. 2008 Feb 28;358(9):910-9 PMID: 18199855
  20. Genome-wide association study of prostate cancer identifies a second risk locus at 8q24.
    Nat Genet. 2007 May;39(5):645-9 PMID: 17401363
  21. DD3(PCA3), a very sensitive and specific marker to detect prostate tumors.
    Cancer Res. 2002 May 1;62(9):2695-8 PMID: 11980670
  22. 8q24 and prostate cancer: association with advanced disease and meta-analysis.
    Eur J Hum Genet. 2008 Apr;16(4):496-505 PMID: 18231127
  23. Operating characteristics of prostate-specific antigen in men with an initial PSA level of 3.0 ng/ml or lower.
    JAMA. 2005 Jul 6;294(1):66-70 PMID: 15998892
  24. Common sequence variants on 2p15 and Xp11.22 confer susceptibility to prostate cancer.
    Nat Genet. 2008 Mar;40(3):281-3 PMID: 18264098
  25. Association between sequence variants at 17q12 and 17q24.3 and prostate cancer risk in European and African Americans.
    Prostate. 2008 May 15;68(7):691-7 PMID: 18361410
  26. EPCA-2: a highly specific serum marker for prostate cancer.
    Urology. 2007 Apr;69(4):714-20 PMID: 17445657
  27. Multiple newly identified loci associated with prostate cancer susceptibility.
    Nat Genet. 2008 Mar;40(3):316-21 PMID: 18264097
  28. POINT: EPCA-2: a promising new serum biomarker for prostatic carcinoma?
    Clin Biochem. 2007 Dec;40(18):1437-9 PMID: 17945209
Article Info
Journal
Clinical cancer research : an official journal of the American Association for Cancer Research
Abbr.
Clin Cancer Res
ISSN
1078-0432
Published
2009-02-01
Pages
1105-11
Language
English
Region
United States
NLM ID
9502500
PMCID
PMC3187807
Subset
IM
Grants
NCI NIH HHS · R01 CA095052 · United States
NCI NIH HHS · CA105055 · United States
NCI NIH HHS · R01 CA105055 · United States
NCI NIH HHS · CA95052 · United States
NCI NIH HHS · CA106523 · United States
NCI NIH HHS · R01 CA106523 · United States
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