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PMID: 19060046 Published · ppublish English Journal Article

Dialister succinatiphilus sp. nov. and Barnesiella intestinihominis sp. nov., isolated from human faeces.

International journal of systematic and evolutionary microbiology ·Vol. 58 ·No. Pt 12 ·2008-12-00 ·Pages 2716-20

Morotomi M, Nagai F, Sakon H, Tanaka R

Abstract

Two anaerobic, non-spore-forming, bacteria (YIT 11850(T) and YIT 11860(T)) that stained Gram-negative, were isolated from human faeces. Cells of strain YIT 11850(T) were coccobacilli, asaccharolytic and largely unreactive, with only traces of lactate and propionate as metabolic end products; however, strain YIT 11850(T) was able to decarboxylate succinate to propionate. The DNA G+C content of strain YIT 11850(T) was 51.9 mol%. Following 16S rRNA gene sequence analysis, this strain was found to be most closely related to Dialister propionicifaciens, with 95.1 % sequence similarity between the two taxa. Biochemical data supported the affiliation of strain YIT 11850(T) to the genus Dialister. Strain YIT 11850(T) therefore represents a novel species for which the name Dialister succinatiphilus sp. nov. is proposed; the type strain is YIT 11850(T) (=DSM 21274(T)=JCM 15077(T)). Cells of the other isolate, strain YIT 11860(T), were non-motile, rod-shaped, positive for aesculin hydrolysis, negative for indole production, produced succinic and acetic acids as end products of glucose metabolism and possessed a DNA G+C content of 45.5 mol%. On the basis of 16S rRNA gene sequence similarity values, this strain was shown to belong to the family 'Porphyromonadaceae' related to Barnesiella viscericola (96.0 %); similarity values with species within the family 'Porphyromonadaceae' with validly published names were less than 86 %. Biochemical data supported the affiliation of strain YIT 11860(T) to the genus Barnesiella. Strain YIT 11860(T) therefore represents a novel species for which the name Barnesiella intestinihominis sp. nov. is proposed; the type strain is YIT 11860(T) (=DSM 21032(T)=JCM 15079(T)).

MeSH Terms
Bacteroidetes/classification,genetics,physiology Feces/microbiology Humans Molecular Sequence Data Phylogeny RNA, Ribosomal, 16S/genetics Species Specificity Veillonellaceae/classification,genetics,physiology
Chemicals
RNA, Ribosomal, 16S
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Morotomi Masami
Yakult Central Institute for Microbiological Research, Kunitachi, Tokyo, Japan. masami-morotomi@yakult.co.jp
Nagai Fumiko
Sakon Hiroshi
Tanaka Ryuichiro
Article Info
Journal
International journal of systematic and evolutionary microbiology
Abbr.
Int J Syst Evol Microbiol
ISSN
1466-5026
Published
2008-12-00
Pages
2716-20
Language
English
Region
England
NLM ID
100899600
Subset
IM
Databases
GENBANK
AB370249, AB370251
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