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PMID: 19037260 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Common thiolation mechanism in the biosynthesis of tRNA thiouridine and sulphur-containing cofactors.

The EMBO journal ·Vol. 27 ·No. 24 ·2008-12-17 ·Pages 3267-78

Shigi N, Sakaguchi Y, Asai S, Suzuki T, Watanabe K

Abstract

2-Thioribothymidine (s(2)T), a modified uridine, is found at position 54 in transfer RNAs (tRNAs) from several thermophiles; s(2)T stabilizes the L-shaped structure of tRNA and is essential for growth at higher temperatures. Here, we identified an ATPase (tRNA-two-thiouridine C, TtuC) required for the 2-thiolation of s(2)T in Thermus thermophilus and examined in vitro s(2)T formation by TtuC and previously identified s(2)T-biosynthetic proteins (TtuA, TtuB, and cysteine desulphurases). The C-terminal glycine of TtuB is first activated as an acyl-adenylate by TtuC and then thiocarboxylated by cysteine desulphurases. The sulphur atom of thiocarboxylated TtuB is transferred to tRNA by TtuA. In a ttuC mutant of T. thermophilus, not only s(2)T, but also molybdenum cofactor and thiamin were not synthesized, suggesting that TtuC is shared among these biosynthetic pathways. Furthermore, we found that a TtuB-TtuC thioester was formed in vitro, which was similar to the ubiquitin-E1 thioester, a key intermediate in the ubiquitin system. The results are discussed in relation to the mechanism and evolution of the eukaryotic ubiquitin system.

MeSH Terms
Adenosine Triphosphatases/genetics,isolation & purification,metabolism Bacterial Proteins/genetics,isolation & purification,metabolism Coenzymes/biosynthesis Gene Deletion Metalloproteins/biosynthesis Models, Biological Molybdenum Cofactors Pteridines RNA, Transfer/metabolism Thermus thermophilus/enzymology,genetics,metabolism Thiamine/biosynthesis Thiouridine/metabolism
Chemicals
Bacterial Proteins Coenzymes Metalloproteins Molybdenum Cofactors Pteridines Thiouridine RNA, Transfer molybdenum cofactor Adenosine Triphosphatases Thiamine
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Shigi Naoki
Biomedicinal Information Research Center (BIRC), National Institute of Advanced Industrial Science and Technology (AIST), Tokyo, Japan.
Sakaguchi Yuriko
Asai Shin-Ichi
Suzuki Tsutomu
Watanabe Kimitsuna
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Article Info
Journal
The EMBO journal
Abbr.
EMBO J
ISSN
1460-2075
Published
2008-12-17
Epub
2008-00-27
Pages
3267-78
Language
English
Region
England
NLM ID
8208664
PMCID
PMC2609741
Subset
IM
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