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PMID: 18983935 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. Review

Toward scalable parts families for predictable design of biological circuits.

Current opinion in microbiology ·Vol. 11 ·No. 6 ·2008-12-00 ·Pages 567-73

Lucks JB, Qi L, Whitaker WR, Arkin AP

Abstract

Our current ability to engineer biological circuits is hindered by design cycles that are costly in terms of time and money, with constructs failing to operate as desired, or evolving away from the desired function once deployed. Synthetic biologists seek to understand biological design principles and use them to create technologies that increase the efficiency of the genetic engineering design cycle. Central to the approach is the creation of biological parts--encapsulated functions that can be composited together to create new pathways with predictable behaviors. We define five desirable characteristics of biological parts--independence, reliability, tunability, orthogonality and composability, and review studies of small natural and synthetic biological circuits that provide insights into each of these characteristics. We propose that the creation of appropriate sets of families of parts with these properties is a prerequisite for efficient, predictable engineering of new function in cells and will enable a large increase in the sophistication of genetic engineering applications.

MeSH Terms
Biotechnology/methods Genetic Engineering Systems Biology
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Lucks Julius B
Department of Bioengineering, University of California, Berkeley CA, United States.
Qi Lei
Whitaker Weston R
Arkin Adam P
Article Info
Journal
Current opinion in microbiology
Abbr.
Curr Opin Microbiol
ISSN
1879-0364
Published
2008-12-00
Epub
2008-00-12
Pages
567-73
Language
English
Region
England
NLM ID
9815056
Subset
IM
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