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PMID: 18641940 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Review

FlyBase : a database for the Drosophila research community.

Methods in molecular biology (Clifton, N.J.) ·Vol. 420 ·2008-00-00 ·Pages 45-59

Drysdale R, FlyBase Consortium

Abstract

FlyBase ( http://flybase.org ) is the primary database of integrated genetic and genomic data about the Drosophilidae, of which Drosophila melanogaster is the most extensively studied species. Information in FlyBase originates from a variety of sources ranging from large-scale genome projects to the primary research literature. Data-types include sequence-level gene models, molecular classification of gene product functions, mutant phenotypes, mutant lesions and chromosome aberrations, gene expression patterns, transgene insertions, and anatomical images. Query tools allow interrogation of FlyBase through DNA or protein sequence, by gene or mutant name, or through terms from the several ontologies used to capture functional, phenotypic, and anatomical data. Links between FlyBase and external databases provide extensive opportunity for extending exploration into other model organism databases and resources of biological and molecular information. This review will introduce the FlyBase web server and query tools.

MeSH Terms
Algorithms Animals Computational Biology/methods Databases, Factual Databases, Genetic Drosophila Proteins/genetics Drosophila melanogaster/genetics,physiology Genes, Insect Genome, Insect Genomics/instrumentation,methods Internet Phenotype Software User-Computer Interface
Chemicals
Drosophila Proteins
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Drysdale Rachel
Department of Genetics, University of Cambridge, Cambridge, UK.
FlyBase Consortium
Article Info
Journal
Methods in molecular biology (Clifton, N.J.)
Abbr.
Methods Mol Biol
ISSN
1064-3745
Published
2008-00-00
Pages
45-59
Language
English
Region
United States
NLM ID
9214969
Subset
IM
Grants
Medical Research Council · G0500293 · United Kingdom
NHGRI NIH HHS · HG00739 · United States
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