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PMID: 18585736 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, N.I.H., Intramural Research Support, U.S. Gov't, Non-P.H.S.

Internal hydration increases during activation of the G-protein-coupled receptor rhodopsin.

Journal of molecular biology ·Vol. 381 ·No. 2 ·2008-08-29 ·Pages 478-86

Grossfield A, Pitman MC, Feller SE, Soubias O, Gawrisch K

Abstract

Rhodopsin, the membrane protein responsible for dim-light vision, until recently was the only G-protein-coupled receptor (GPCR) with a known crystal structure. As a result, there is enormous interest in studying its structure, dynamics, and function. Here we report the results of three all-atom molecular dynamics simulations, each at least 1.5 micros, which predict that substantial changes in internal hydration play a functional role in rhodopsin activation. We confirm with (1)H magic angle spinning NMR that the increased hydration is specific to the metarhodopsin-I intermediate. The internal water molecules interact with several conserved residues, suggesting that changes in internal hydration may be important during the activation of other GPCRs. The results serve to illustrate the synergism of long-time-scale molecular dynamics simulations and NMR in enhancing our understanding of GPCR function.

MeSH Terms
Computer Simulation Magnetic Resonance Spectroscopy Models, Molecular Receptors, G-Protein-Coupled/chemistry Rhodopsin/chemistry Thermodynamics Water/chemistry
Chemicals
Receptors, G-Protein-Coupled Water metarhodopsins Rhodopsin
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Grossfield Alan
IBM TJ Watson Research Center, 1101 Kitchawan Road, PO Box 218, Yorktown Heights, NY 10598, USA.
Pitman Michael C
Feller Scott E
Soubias Olivier
Gawrisch Klaus
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Article Info
Journal
Journal of molecular biology
Abbr.
J Mol Biol
ISSN
1089-8638
Published
2008-08-29
Epub
2008-00-22
Pages
478-86
Language
English
Region
England
NLM ID
2985088R
PMCID
PMC3987891
Subset
IM
Grants
NEI NIH HHS · PN2 EY016570 · United States
Intramural NIH HHS · ZIA AA000003-17 · United States
NEI NIH HHS · PN2 EY016570B · United States
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