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PMID: 18441212 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Analysis of the Arabidopsis histidine kinase ATHK1 reveals a connection between vegetative osmotic stress sensing and seed maturation.

The Plant cell ·Vol. 20 ·No. 4 ·2008-04-00 ·Pages 1101-17

Wohlbach DJ, Quirino BF, Sussman MR

Abstract

To cope with water stress, plants must be able to effectively sense, respond to, and adapt to changes in water availability. The Arabidopsis thaliana plasma membrane His kinase ATHK1 has been suggested to act as an osmosensor that detects water stress and initiates downstream responses. Here, we provide direct genetic evidence that ATHK1 not only is involved in the water stress response during early vegetative stages of plant growth but also plays a unique role in the regulation of desiccation processes during seed formation. To more comprehensively identify genes involved in the downstream pathways affected by the ATHK1-mediated response to water stress, we created a large-scale summary of expression data, termed the AtMegaCluster. In the AtMegaCluster, hierarchical clustering techniques were used to compare whole-genome expression levels in athk1 mutants with the expression levels reported in publicly available data sets of Arabidopsis tissues grown under a wide variety of conditions. These experiments revealed that ATHK1 is cotranscriptionally regulated with several Arabidopsis response regulators, together with two proteins containing novel sequences. Since overexpression of ATHK1 results in increased water stress tolerance, our observations suggest a new top-down route to increasing drought resistance via receptor-mediated increases in sensing water status, rather than through genetically engineered changes in downstream transcription factors or specific osmolytes.

MeSH Terms
Abscisic Acid/metabolism Arabidopsis/embryology,enzymology Arabidopsis Proteins/genetics,metabolism Base Sequence Cation Transport Proteins/genetics,metabolism DNA Primers Molecular Sequence Data Mutation Osmotic Pressure RNA, Messenger/genetics Reverse Transcriptase Polymerase Chain Reaction Seeds/growth & development Symporters/genetics,metabolism
Chemicals
Arabidopsis Proteins Cation Transport Proteins DNA Primers HKT1 protein, Arabidopsis RNA, Messenger Symporters Abscisic Acid
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Wohlbach Dana J
Department of Genetics, University of Wisconsin, Madison, Wisconsin 53706, USA.
Quirino Betania F
Sussman Michael R
References (48)
48 references, click to expand
  1. Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana.
    Plant J. 1998 Dec;16(6):735-43 PMID: 10069079
  2. Exploration, normalization, and summaries of high density oligonucleotide array probe level data.
    Biostatistics. 2003 Apr;4(2):249-64 PMID: 12925520
  3. TM4: a free, open-source system for microarray data management and analysis.
    Biotechniques. 2003 Feb;34(2):374-8 PMID: 12613259
  4. Biochemical characterization of the aba2 and aba3 mutants in Arabidopsis thaliana.
    Plant Physiol. 1997 May;114(1):161-6 PMID: 9159947
  5. Embryogenesis in Higher Plants: An Overview.
    Plant Cell. 1993 Oct;5(10):1361-1369 PMID: 12271035
  6. A novel cis-acting element in an Arabidopsis gene is involved in responsiveness to drought, low-temperature, or high-salt stress.
    Plant Cell. 1994 Feb;6(2):251-64 PMID: 8148648
  7. A transmembrane hybrid-type histidine kinase in Arabidopsis functions as an osmosensor.
    Plant Cell. 1999 Sep;11(9):1743-54 PMID: 10488240
  8. Molecular identification of zeaxanthin epoxidase of Nicotiana plumbaginifolia, a gene involved in abscisic acid biosynthesis and corresponding to the ABA locus of Arabidopsis thaliana.
    EMBO J. 1996 May 15;15(10):2331-42 PMID: 8665840
  9. Comparison of yeast cell protein solubilization procedures for two-dimensional electrophoresis.
    Electrophoresis. 1999 Apr-May;20(4-5):826-9 PMID: 10344254
  10. ABA action and interactions in seeds.
    Trends Plant Sci. 2003 May;8(5):213-7 PMID: 12758038
  11. Comprehensive algorithm for quantitative real-time polymerase chain reaction.
    J Comput Biol. 2005 Oct;12(8):1047-64 PMID: 16241897
  12. Elucidation of the indirect pathway of abscisic acid biosynthesis by mutants, genes, and enzymes.
    Plant Physiol. 2003 Apr;131(4):1591-601 PMID: 12692318
  13. Stress-responsive expression of genes for two-component response regulator-like proteins in Arabidopsis thaliana.
    FEBS Lett. 1998 May 8;427(2):175-8 PMID: 9607306
  14. The G-box: a ubiquitous regulatory DNA element in plants bound by the GBF family of bZIP proteins.
    Trends Biochem Sci. 1995 Dec;20(12):506-10 PMID: 8571452
  15. Arabidopsis response regulators ARR3 and ARR4 play cytokinin-independent roles in the control of circadian period.
    Plant Cell. 2006 Jan;18(1):55-69 PMID: 16326927
  16. Regulatory sequence analysis tools.
    Nucleic Acids Res. 2003 Jul 1;31(13):3593-6 PMID: 12824373
  17. Nuclear proteins bind conserved elements in the abscisic acid-responsive promoter of a rice rab gene.
    Proc Natl Acad Sci U S A. 1990 Feb;87(4):1406-10 PMID: 2137613
  18. Abiotic stress signalling pathways: specificity and cross-talk.
    Trends Plant Sci. 2001 Jun;6(6):262-7 PMID: 11378468
  19. Probability-based protein identification by searching sequence databases using mass spectrometry data.
    Electrophoresis. 1999 Dec;20(18):3551-67 PMID: 10612281
  20. Summaries of Affymetrix GeneChip probe level data.
    Nucleic Acids Res. 2003 Feb 15;31(4):e15 PMID: 12582260
  21. In Vivo Inhibition of Seed Development and Reserve Protein Accumulation in Recombinants of Abscisic Acid Biosynthesis and Responsiveness Mutants in Arabidopsis thaliana.
    Plant Physiol. 1989 Jun;90(2):463-9 PMID: 16666794
  22. Transcriptional regulatory networks in cellular responses and tolerance to dehydration and cold stresses.
    Annu Rev Plant Biol. 2006;57:781-803 PMID: 16669782
  23. Comparison of mRNA gene expression by RT-PCR and DNA microarray.
    Biotechniques. 2004 Apr;36(4):618-20, 622, 624-6 PMID: 15088380
  24. Plant two-component signaling systems and the role of response regulators.
    Plant Physiol. 2002 Feb;128(2):363-9 PMID: 11842140
  25. Complex regulation of ABA biosynthesis in plants.
    Trends Plant Sci. 2002 Jan;7(1):41-8 PMID: 11804826
  26. Plant mitogen-activated protein kinase signaling cascades.
    Curr Opin Plant Biol. 2001 Oct;4(5):392-400 PMID: 11597496
  27. Abscisic acid signaling in seeds and seedlings.
    Plant Cell. 2002;14 Suppl:S15-45 PMID: 12045268
  28. Java Treeview--extensible visualization of microarray data.
    Bioinformatics. 2004 Nov 22;20(17):3246-8 PMID: 15180930
  29. A plant leucine zipper protein that recognizes an abscisic acid response element.
    Science. 1990 Oct 12;250(4978):267-71 PMID: 2145628
  30. PLANT CELLULAR AND MOLECULAR RESPONSES TO HIGH SALINITY.
    Annu Rev Plant Physiol Plant Mol Biol. 2000 Jun;51:463-499 PMID: 15012199
  31. Implications of 15N-metabolic labeling for automated peptide identification in Arabidopsis thaliana.
    Proteomics. 2007 Apr;7(8):1279-92 PMID: 17443642
  32. Molecular cloning, genomic organization, expression and evolution of 12S seed storage protein genes of Arabidopsis thaliana.
    Plant Mol Biol. 1988 Nov;11(6):805-20 PMID: 24272631
  33. Salt and drought stress signal transduction in plants.
    Annu Rev Plant Biol. 2002;53:247-73 PMID: 12221975
  34. T-DNA as an insertional mutagen in Arabidopsis.
    Plant Cell. 1999 Dec;11(12):2283-90 PMID: 10590158
  35. Yeast osmosensor Sln1 and plant cytokinin receptor Cre1 respond to changes in turgor pressure.
    J Cell Biol. 2003 Jun 23;161(6):1035-40 PMID: 12821642
  36. Isolation of total RNA from Arabidopsis thaliana seeds.
    Anal Biochem. 1999 Mar 15;268(2):412-3 PMID: 10075836
  37. Organization of cis-acting regulatory elements in osmotic- and cold-stress-responsive promoters.
    Trends Plant Sci. 2005 Feb;10(2):88-94 PMID: 15708346
  38. Cluster analysis and display of genome-wide expression patterns.
    Proc Natl Acad Sci U S A. 1998 Dec 8;95(25):14863-8 PMID: 9843981
  39. Measurement of protein using bicinchoninic acid.
    Anal Biochem. 1985 Oct;150(1):76-85 PMID: 3843705
  40. Type-A Arabidopsis response regulators are partially redundant negative regulators of cytokinin signaling.
    Plant Cell. 2004 Mar;16(3):658-71 PMID: 14973166
  41. Two-component signal transduction pathways in Arabidopsis.
    Plant Physiol. 2002 Jun;129(2):500-15 PMID: 12068096
  42. GeneBins: a database for classifying gene expression data, with application to plant genome arrays.
    BMC Bioinformatics. 2007 Mar 12;8:87 PMID: 17349060
  43. Role of arabidopsis MYC and MYB homologs in drought- and abscisic acid-regulated gene expression.
    Plant Cell. 1997 Oct;9(10):1859-68 PMID: 9368419
  44. A comparison of normalization methods for high density oligonucleotide array data based on variance and bias.
    Bioinformatics. 2003 Jan 22;19(2):185-93 PMID: 12538238
  45. ATTED-II: a database of co-expressed genes and cis elements for identifying co-regulated gene groups in Arabidopsis.
    Nucleic Acids Res. 2007 Jan;35(Database issue):D863-9 PMID: 17130150
  46. Functional analysis of AHK1/ATHK1 and cytokinin receptor histidine kinases in response to abscisic acid, drought, and salt stress in Arabidopsis.
    Proc Natl Acad Sci U S A. 2007 Dec 18;104(51):20623-8 PMID: 18077346
  47. A method for profiling classes of plant hormones and their metabolites using liquid chromatography-electrospray ionization tandem mass spectrometry: an analysis of hormone regulation of thermodormancy of lettuce (Lactuca sativa L.) seeds.
    Plant J. 2003 Aug;35(3):405-17 PMID: 12887591
  48. THE MOLECULAR BASIS OF DEHYDRATION TOLERANCE IN PLANTS.
    Annu Rev Plant Physiol Plant Mol Biol. 1996 Jun;47:377-403 PMID: 15012294
Article Info
Journal
The Plant cell
Abbr.
Plant Cell
ISSN
1040-4651
Published
2008-04-00
Epub
2008-00-25
Pages
1101-17
Language
English
Region
England
NLM ID
9208688
PMCID
PMC2390728
Subset
IM
Databases
GENBANK
AC007154, AF446894, ATU66916, AY062661, AY062849, AY072508, AY082344, AY093005, AY093145, AY093779, AY128731, AY136415, AY519511, BT002073, BT002206, BT011656, BT015111, BT029491
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