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PMID: 17920020 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Closing in on the resting state of the Shaker K(+) channel.

Neuron ·Vol. 56 ·No. 1 ·2007-10-04 ·Pages 124-40

Pathak MM, Yarov-Yarovoy V, Agarwal G, Roux B, Barth P, Kohout S, Tombola F, Isacoff EY

Abstract

Membrane depolarization causes voltage-gated ion channels to transition from a resting/closed conformation to an activated/open conformation. We used voltage-clamp fluorometry to measure protein motion at specific regions of the Shaker Kv channel. This enabled us to construct new structural models of the resting/closed and activated/open states based on the Kv1.2 crystal structure using the Rosetta-Membrane method and molecular dynamics simulations. Our models account for the measured gating charge displacement and suggest a molecular mechanism of activation in which the primary voltage sensors, S4s, rotate by approximately 180 degrees as they move "outward" by 6-8 A. A subsequent tilting motion of the S4s and the pore domain helices, S5s, of all four subunits induces a concerted movement of the channel's S4-S5 linkers and S6 helices, allowing ion conduction. Our models are compatible with a wide body of data and resolve apparent contradictions that previously led to several distinct models of voltage sensing.

MeSH Terms
Animals Dose-Response Relationship, Radiation Electric Stimulation Ion Channel Gating/physiology Membrane Potentials/physiology,radiation effects Models, Biological Models, Molecular Mutation/physiology Oocytes Patch-Clamp Techniques/methods Protein Conformation Protein Structure, Tertiary Shaker Superfamily of Potassium Channels/physiology Structure-Activity Relationship
Chemicals
Shaker Superfamily of Potassium Channels
Authors & Affiliations
8 authors, click to expand affiliations / ORCID
Pathak Medha M
Biophysics Graduate Program, University of California Berkeley, Berkeley, CA 94720, USA.
Yarov-Yarovoy Vladimir
Agarwal Gautam
Roux Benoît
Barth Patrick
Kohout Susy
Tombola Francesco
Isacoff Ehud Y
Article Info
Journal
Neuron
Abbr.
Neuron
ISSN
0896-6273
Published
2007-10-04
Pages
124-40
Language
English
Region
United States
NLM ID
8809320
Subset
IM
Grants
NIGMS NIH HHS · R01 GM062342 · United States
NIMH NIH HHS · K01 MH67625 · United States
NINDS NIH HHS · R01 NS035549 · United States
NIGMS NIH HHS · GM62342 · United States
NINDS NIH HHS · R01 NS15751 · United States
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