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PMID: 17728401 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Ancient bacteria show evidence of DNA repair.

Johnson SS, Hebsgaard MB, Christensen TR, Mastepanov M, Nielsen R, Munch K, Brand T, Gilbert MT, Zuber MT, Bunce M, Rønn R, Gilichinsky D, Froese D, Willerslev E

Abstract

Recent claims of cultivable ancient bacteria within sealed environments highlight our limited understanding of the mechanisms behind long-term cell survival. It remains unclear how dormancy, a favored explanation for extended cellular persistence, can cope with spontaneous genomic decay over geological timescales. There has been no direct evidence in ancient microbes for the most likely mechanism, active DNA repair, or for the metabolic activity necessary to sustain it. In this paper, we couple PCR and enzymatic treatment of DNA with direct respiration measurements to investigate long-term survival of bacteria sealed in frozen conditions for up to one million years. Our results show evidence of bacterial survival in samples up to half a million years in age, making this the oldest independently authenticated DNA to date obtained from viable cells. Additionally, we find strong evidence that this long-term survival is closely tied to cellular metabolic activity and DNA repair that over time proves to be superior to dormancy as a mechanism in sustaining bacteria viability.

MeSH Terms
Bacteria/genetics Base Sequence DNA Repair/genetics DNA, Bacterial/genetics Gene Amplification/genetics Molecular Sequence Data Soil Microbiology
Chemicals
DNA, Bacterial
Authors & Affiliations
14 authors, click to expand affiliations / ORCID
Johnson Sarah Stewart
Department of Earth, Atmospheric, and Planetary Sciences, Massachusetts Institute of Technology, 77 Massachusetts Avenue, 54-810, Cambridge, MA 02139, USA.
Hebsgaard Martin B
Christensen Torben R
Mastepanov Mikhail
Nielsen Rasmus
Munch Kasper
Brand Tina
Gilbert M Thomas P
Zuber Maria T
Bunce Michael
Rønn Regin
Gilichinsky David
Froese Duane
Willerslev Eske
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Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
2007-09-04
Epub
2007-00-29
Pages
14401-5
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC1958816
Subset
IM
Grants
Wellcome Trust · United Kingdom
Databases
GENBANK
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