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PMID: 17477556 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Tag-mass: specific molecular imaging of transcriptome and proteome by mass spectrometry based on photocleavable tag.

Journal of proteome research ·Vol. 6 ·No. 6 ·2007-06-00 ·Pages 2057-67

Lemaire R, Stauber J, Wisztorski M, Van Camp C, Desmons A, Deschamps M, Proess G, Rudlof I, Woods AS, Day R, Salzet M, Fournier I

Abstract

MALDI tissue imaging of tissues has become a promising technique for tracking biomarkers while determining their location and structural characterization. We have now developed specific targeting probes (oligonucleotides, antibodies), named Tag-Mass. This approach is based on probes modified with a photocleavable linker coupled with a tag cleaved and detected using mass spectrometry. Tag-Mass development is the key for a rapid, sensitive, and accurate approach to correlate levels of expression of different mRNA or proteins in diseases.

MeSH Terms
Animals Antibodies/chemistry Brain Chemistry Mice Molecular Probes/chemistry Oligonucleotide Probes/chemistry Photolysis Proteins/analysis Proteome/genetics Proteomics/methods RNA, Messenger/analysis Rats Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods Transcription, Genetic
Chemicals
Antibodies Molecular Probes Oligonucleotide Probes Proteins Proteome RNA, Messenger
Authors & Affiliations
12 authors, click to expand affiliations / ORCID
Lemaire R
Laboratoire de Neuroimmunologie des Annélides, FRE CNRS 2933, MALDI Imaging Team, Université des Sciences et Technologies de Lille, 59655 Villeneuve d'Ascq Cedex, France.
Stauber J
Wisztorski M
Van Camp C
Desmons A
Deschamps M
Proess G
Rudlof I
Woods A S
Day R
Salzet M
Fournier I
References (19)
19 references, click to expand
  1. Photocleavable peptide-DNA conjugates: synthesis and applications to DNA analysis using MALDI-MS.
    Nucleic Acids Res. 1999 Dec 1;27(23):4626-31 PMID: 10556319
  2. HER-2/neu in breast cancer: a comparative study between histology, immunohistochemistry, and molecular technique (FISH).
    Appl Immunohistochem Mol Morphol. 2006 Jun;14(2):127-31 PMID: 16785778
  3. Recent developments in signal amplification methods for in situ hybridization.
    Diagn Mol Pathol. 2003 Mar;12(1):1-13 PMID: 12605030
  4. Direct analysis of neuropeptides by in situ MALDI-TOF mass spectrometry in the rat brain.
    Neuro Endocrinol Lett. 2003 Feb-Apr;24(1-2):9-14 PMID: 12743525
  5. Profiling and imaging proteins in tissue sections by MS.
    Anal Chem. 2004 Mar 1;76(5):87A-93A PMID: 15008156
  6. Cellular localization of proenkephalin mRNA in rat brain: gene expression in the caudate-putamen and cerebellar cortex.
    Proc Natl Acad Sci U S A. 1986 Aug;83(16):6221-5 PMID: 3461484
  7. Comparison of IR- and UV-matrix-assisted laser desorption/ionization mass spectrometry of oligodeoxynucleotides.
    Nucleic Acids Res. 1994 Jul 11;22(13):2460-5 PMID: 8041606
  8. Nonradioactive in situ hybridization with digoxigenin.
    Trends Genet. 1992 Jan;8(1):8 PMID: 1285438
  9. Molecular imaging of biological samples: localization of peptides and proteins using MALDI-TOF MS.
    Anal Chem. 1997 Dec 1;69(23):4751-60 PMID: 9406525
  10. Carboxypeptidase D is a potential candidate to carry out redundant processing functions of carboxypeptidase E based on comparative distribution studies in the rat central nervous system.
    Neuroscience. 1999;89(4):1301-17 PMID: 10362316
  11. Detection of double-stranded DNA by IR- and UV-MALDI mass spectrometry.
    Anal Chem. 1999 Jul 1;71(13):2334-9 PMID: 10405601
  12. MALDI mass spectrometric imaging of biological tissue sections.
    Mech Ageing Dev. 2005 Jan;126(1):177-85 PMID: 15610777
  13. Direct tissue analysis of phospholipids in rat brain using MALDI-TOFMS and MALDI-ion mobility-TOFMS.
    J Am Soc Mass Spectrom. 2005 Feb;16(2):133-8 PMID: 15694763
  14. Tissue profiling by mass spectrometry: a review of methodology and applications.
    Mol Cell Proteomics. 2005 Apr;4(4):394-401 PMID: 15677390
  15. Imaging mass spectrometry: fundamentals and applications to drug discovery.
    Drug Discov Today. 2005 Jun 15;10(12):823-37 PMID: 15970265
  16. Direct profiling of lipid distribution in brain tissue using MALDI-TOFMS.
    Anal Chem. 2005 Jul 15;77(14):4523-7 PMID: 16013869
  17. Lipopolysaccharide mediated regulation of neuroendocrine associated proprotein convertases and neuropeptide precursor processing in the rat spleen.
    J Neuroimmunol. 2006 Feb;171(1-2):57-71 PMID: 16337011
  18. Solid ionic matrixes for direct tissue analysis and MALDI imaging.
    Anal Chem. 2006 Feb 1;78(3):809-19 PMID: 16448055
  19. Imaging mass spectrometry: a new technology for the analysis of protein expression in mammalian tissues.
    Nat Med. 2001 Apr;7(4):493-6 PMID: 11283679
Article Info
Journal
Journal of proteome research
Abbr.
J Proteome Res
ISSN
1535-3893
Published
2007-06-00
Epub
2007-00-04
Pages
2057-67
Language
English
Region
United States
NLM ID
101128775
PMCID
PMC2947822
Subset
IM
Grants
Intramural NIH HHS · Z99 DA999999 · United States
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