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PMID: 17139850 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

The family Pleosporaceae: intergeneric relationships and phylogenetic perspectives based on sequence analyses of partial 28S rDNA.

Mycologia ·Vol. 98 ·No. 4 ·2006-00-00 ·Pages 571-83

Kodsueb R, Dhanasekaran V, Aptroot A, Lumyong S, McKenzie EH, Hyde KD, Jeewon R

Abstract

The Pleosporaceae is an important loculoascomycete family. There has been disagreement, however, regarding the taxonomic placement of many genera within this family. This study investigates phylogenetic relationships among the genera Cochliobolus, Kirschsteiniothelia, Leptosphaerulina, Macroventuria, Pleospora, Pyrenophora, and Wettsteinina. Partial 28S rDNA sequences from taxa within these genera were analyzed with maximum parsimony, likelihood and Bayesian methods. Cochliobolus can be segregated broadly into two groups as previously proposed. Pleospora is polyphyletic in its current sense. Taxa with Stemphylium anamorphs are closely related to Cochliobolus and fit within the Pleosporaceae, whereas the affinities of Pleospora herbarum and P. ambigua are still ambiguous. Pyrenophora constitutes a monophyletic group within the Pleosporaceae, whereas Leptosphaerulina and Macroventuria appear to share phylogenetic affinities with the Leptosphaeriaceae and Phaeosphaeriaceae. Phylogenies indicate that Wettsteinina should be excluded from the Pleosporaceae. Similar findings are reported for Kirschsteiniothelia, which is probably polyphyletic. Anamorphic characters appear to be significant (especially in Cochliobolus) while ascospore morphologies, such as shape and color and substrate occurrence are poor indicators of phylogenetic relationships among these loculoascomycetes.

MeSH Terms
Ascomycota/classification,genetics Base Sequence Bayes Theorem DNA, Fungal/genetics DNA, Ribosomal/genetics Phylogeny RNA, Ribosomal, 28S/genetics Sequence Alignment
Chemicals
DNA, Fungal DNA, Ribosomal RNA, Ribosomal, 28S
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Kodsueb Rampai
Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, Thailand.
Dhanasekaran Vijaykrishna
Aptroot André
Lumyong Saisamorn
McKenzie Eric H C
Hyde Kevin D
Jeewon Rajesh
Article Info
Journal
Mycologia
Abbr.
Mycologia
ISSN
0027-5514
Published
2006-00-00
Pages
571-83
Language
English
Region
England
NLM ID
0400764
Subset
IM
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