-
Origin of the Alu family: a family of Alu-like monomers gave birth to the left and the right arms of the Alu elements.
Nucleic Acids Res. 1992 Jul 11;20(13):3397-401
PMID: 1378589
-
On "genomenclature": a comprehensive (and respectful) taxonomy for pseudogenes and other "junk DNA".
Proc Natl Acad Sci U S A. 1992 Nov 15;89(22):10706-10
PMID: 1279691
-
Alu transcripts: cytoplasmic localisation and regulation by DNA methylation.
Nucleic Acids Res. 1994 Mar 25;22(6):1087-95
PMID: 7512262
-
Alu sequences in the coding regions of mRNA: a source of protein variability.
Trends Genet. 1994 Jun;10(6):188-93
PMID: 8073532
-
Cell stress and translational inhibitors transiently increase the abundance of mammalian SINE transcripts.
Nucleic Acids Res. 1995 May 25;23(10):1758-65
PMID: 7784180
-
The SRP9/14 subunit of the signal recognition particle (SRP) is present in more than 20-fold excess over SRP in primate cells and exists primarily free but also in complex with small cytoplasmic Alu RNAs.
Mol Biol Cell. 1995 Apr;6(4):471-84
PMID: 7542942
-
Splice-mediated insertion of an Alu sequence in the COL4A3 mRNA causing autosomal recessive Alport syndrome.
Hum Mol Genet. 1995 Apr;4(4):675-9
PMID: 7633417
-
The birth of an alternatively spliced exon: 3' splice-site selection in Alu exons.
Science. 2003 May 23;300(5623):1288-91
PMID: 12764196
-
LINE-mediated retrotransposition of marked Alu sequences.
Nat Genet. 2003 Sep;35(1):41-8
PMID: 12897783
-
Partial deficiency of the C-terminal-domain phosphatase of RNA polymerase II is associated with congenital cataracts facial dysmorphism neuropathy syndrome.
Nat Genet. 2003 Oct;35(2):185-9
PMID: 14517542
-
Mechanisms of alternative pre-messenger RNA splicing.
Annu Rev Biochem. 2003;72:291-336
PMID: 12626338
-
Liver disintegration in the mouse embryo caused by deficiency in the RNA-editing enzyme ADAR1.
J Biol Chem. 2004 Feb 6;279(6):4894-902
PMID: 14615479
-
Minimal conditions for exonization of intronic sequences: 5' splice site formation in alu exons.
Mol Cell. 2004 Apr 23;14(2):221-31
PMID: 15099521
-
LINE-1 retrotransposons: modulators of quantity and quality of mammalian gene expression?
Bioessays. 2005 Aug;27(8):775-84
PMID: 16015595
-
Exonization of AluYa5 in the human ACE gene requires mutations in both 3' and 5' splice sites and is facilitated by a conserved splicing enhancer.
Nucleic Acids Res. 2005;33(12):3897-906
PMID: 16027113
-
Identification of splicing silencers and enhancers in sense Alus: a role for pseudoacceptors in splice site repression.
Mol Cell Biol. 2005 Aug;25(16):6912-20
PMID: 16055705
-
ADAR gene family and A-to-I RNA editing: diverse roles in posttranscriptional gene regulation.
Prog Nucleic Acid Res Mol Biol. 2005;79:299-338
PMID: 16096031
-
Extensive adenosine-to-inosine editing detected in Alu repeats of antisense RNAs reveals scarcity of sense-antisense duplex formation.
FEBS Lett. 2006 Apr 17;580(9):2301-5
PMID: 16574103
-
Alu RNP and Alu RNA regulate translation initiation in vitro.
Nucleic Acids Res. 2006;34(8):2374-85
PMID: 16682445
-
LINE FUSION GENES: a database of LINE expression in human genes.
BMC Genomics. 2006;7:139
PMID: 16756682
-
The frequency and position of Alu repeats in cDNAs, as determined by database searching.
Genomics. 1995 Jun 10;27(3):544-8
PMID: 7558040
-
The role of RNA editing in controlling glutamate receptor channel properties.
J Neurochem. 1996 Jan;66(1):1-5
PMID: 8522940
-
Distinct transcription start sites generate two forms of BRCA1 mRNA.
Hum Mol Genet. 1995 Dec;4(12):2259-64
PMID: 8634696
-
Monomeric scAlu and nascent dimeric Alu RNAs induced by adenovirus are assembled into SRP9/14-containing RNPs in HeLa cells.
Nucleic Acids Res. 1996 Nov 1;24(21):4165-70
PMID: 8932367
-
Complete genomic sequence and analysis of 117 kb of human DNA containing the gene BRCA1.
Genome Res. 1996 Nov;6(11):1029-49
PMID: 8938427
-
The SRP9/14 subunit of the human signal recognition particle binds to a variety of Alu-like RNAs and with higher affinity than its mouse homolog.
Nucleic Acids Res. 1997 Jan 15;25(2):318-26
PMID: 9016560
-
Editing of glutamate receptor B subunit ion channel RNAs by four alternatively spliced DRADA2 double-stranded RNA adenosine deaminases.
Mol Cell Biol. 1997 May;17(5):2413-24
PMID: 9111310
-
Regulation of serotonin-2C receptor G-protein coupling by RNA editing.
Nature. 1997 May 15;387(6630):303-8
PMID: 9153397
-
Complex regulation of the BRCA1 gene.
J Biol Chem. 1997 Aug 22;272(34):20994-7
PMID: 9261099
-
Potential Alu function: regulation of the activity of double-stranded RNA-activated kinase PKR.
Mol Cell Biol. 1998 Jan;18(1):58-68
PMID: 9418853
-
Inosine exists in mRNA at tissue-specific levels and is most abundant in brain mRNA.
EMBO J. 1998 Feb 16;17(4):1120-7
PMID: 9463389
-
Control of genes by mammalian retroposons.
Int Rev Cytol. 1999;186:1-48
PMID: 9770296
-
A mutation (IVS8+0.6kbdelTC) creating a new donor splice site activates a cryptic exon in an Alu-element in intron 8 of the human beta-glucuronidase gene.
Hum Genet. 1998 Dec;103(6):686-93
PMID: 9921904
-
Widespread A-to-I RNA editing of Alu-containing mRNAs in the human transcriptome.
PLoS Biol. 2004 Dec;2(12):e391
PMID: 15534692
-
Is abundant A-to-I RNA editing primate-specific?
Trends Genet. 2005 Feb;21(2):77-81
PMID: 15661352
-
Alu-SINE exonization: en route to protein-coding function.
Mol Biol Evol. 2005 Aug;22(8):1702-11
PMID: 15901843
-
Analysis of transcription factors binding to the human 7SL RNA gene promoter.
Biochem Cell Biol. 1999;77(5):431-8
PMID: 10593606
-
Drosophila Dscam is an axon guidance receptor exhibiting extraordinary molecular diversity.
Cell. 2000 Jun 9;101(6):671-84
PMID: 10892653
-
Point mutation in an AMPA receptor gene rescues lethality in mice deficient in the RNA-editing enzyme ADAR2.
Nature. 2000 Jul 6;406(6791):78-81
PMID: 10894545
-
The 3' UTR of human MnSOD mRNA hybridizes to a small cytoplasmic RNA and inhibits gene expression.
Biochem Biophys Res Commun. 2000 Aug 11;274(3):641-8
PMID: 10924331
-
A-to-I pre-mRNA editing in Drosophila is primarily involved in adult nervous system function and integrity.
Cell. 2000 Aug 18;102(4):437-49
PMID: 10966106
-
Structure and assembly of the Alu domain of the mammalian signal recognition particle.
Nature. 2000 Nov 9;408(6809):167-73
PMID: 11089964
-
Initial sequencing and analysis of the human genome.
Nature. 2001 Feb 15;409(6822):860-921
PMID: 11237011
-
Hierarchical assembly of the Alu domain of the mammalian signal recognition particle.
RNA. 2001 May;7(5):731-40
PMID: 11350037
-
Repetitive elements in the 5' untranslated region of a human zinc-finger gene modulate transcription and translation efficiency.
Genomics. 2001 Aug;76(1-3):110-6
PMID: 11549323
-
Differential stress induction of individual Alu loci: implications for transcription and retrotransposition.
Gene. 2001 Oct 3;276(1-2):135-41
PMID: 11591480
-
Transposable elements are found in a large number of human protein-coding genes.
Trends Genet. 2001 Nov;17(11):619-21
PMID: 11672845
-
Alu elements in human growth hormone receptor gene 5' untranslated region exons.
J Mol Endocrinol. 2001 Dec;27(3):357-66
PMID: 11719288
-
A genomic view of alternative splicing.
Nat Genet. 2002 Jan;30(1):13-9
PMID: 11753382
-
Alu repeats and human genomic diversity.
Nat Rev Genet. 2002 May;3(5):370-9
PMID: 11988762
-
Altered editing of serotonin 2C receptor pre-mRNA in the prefrontal cortex of depressed suicide victims.
Neuron. 2002 Apr 25;34(3):349-56
PMID: 11988167
-
Structural determinants of BRCA1 translational regulation.
J Biol Chem. 2002 May 10;277(19):17349-58
PMID: 11877386
-
Alu-containing exons are alternatively spliced.
Genome Res. 2002 Jul;12(7):1060-7
PMID: 12097342
-
Selective stimulation of translational expression by Alu RNA.
Nucleic Acids Res. 2002 Jul 15;30(14):3253-61
PMID: 12136107
-
RNA editing by adenosine deaminases generates RNA and protein diversity.
Biochimie. 2002 Aug;84(8):791-803
PMID: 12457566
-
Conservation of human alternative splice events in mouse.
Nucleic Acids Res. 2003 May 15;31(10):2544-52
PMID: 12736303
-
Alu elements contain many binding sites for transcription factors and may play a role in regulation of developmental processes.
BMC Genomics. 2006;7:133
PMID: 16740159
-
Alu elements within human mRNAs are probable microRNA targets.
Trends Genet. 2006 Oct;22(10):532-6
PMID: 16914224
-
RNA editing level in the mouse is determined by the genomic repeat repertoire.
RNA. 2006 Oct;12(10):1802-9
PMID: 16940548
-
PKR; a sentinel kinase for cellular stress.
Oncogene. 1999 Nov 1;18(45):6112-20
PMID: 10557102
-
RNAs from all categories generate retrosequences that may be exapted as novel genes or regulatory elements.
Gene. 1999 Sep 30;238(1):115-34
PMID: 10570990
-
Systematic identification of abundant A-to-I editing sites in the human transcriptome.
Nat Biotechnol. 2004 Aug;22(8):1001-5
PMID: 15258596
-
From "junk" to gene: curriculum vitae of a primate receptor isoform gene.
J Mol Biol. 2004 Aug 20;341(4):883-6
PMID: 15328599
-
Widespread RNA editing of embedded alu elements in the human transcriptome.
Genome Res. 2004 Sep;14(9):1719-25
PMID: 15342557
-
Selfish DNA: the ultimate parasite.
Nature. 1980 Apr 17;284(5757):604-7
PMID: 7366731
-
Selfish DNA.
Nature. 1980 Dec 25;288(5792):645-6
PMID: 7453798
-
Structure, polymorphism, and novel repeated DNA elements revealed by a complete sequence of the human alpha-fetoprotein gene.
Biochemistry. 1987 Mar 10;26(5):1332-43
PMID: 2436661
-
Alu RNA secondary structure consists of two independent 7 SL RNA-like folding units.
J Biol Chem. 1991 May 15;266(14):8675-8
PMID: 1709156
-
Binding sites of the 9- and 14-kilodalton heterodimeric protein subunit of the signal recognition particle (SRP) are contained exclusively in the Alu domain of SRP RNA and contain a sequence motif that is conserved in evolution.
Mol Cell Biol. 1991 Aug;11(8):3949-59
PMID: 1712900
-
Fusion of a free left Alu monomer and a free right Alu monomer at the origin of the Alu family in the primate genomes.
Nucleic Acids Res. 1992 Feb 11;20(3):487-93
PMID: 1741283