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PMID: 16884290 Published · ppublish English Journal Article

Accurate prediction of the relative potencies of members of a series of kinase inhibitors using molecular docking and MM-GBSA scoring.

Journal of medicinal chemistry ·Vol. 49 ·No. 16 ·2006-08-10 ·Pages 4805-8

Lyne PD, Lamb ML, Saeh JC

Abstract

The ability of molecular docking, using the program Glide and an MM-GBSA postdocking scoring protocol, to correctly rank a number of congeneric kinase inhibitors was assessed. The approach was successful for the cases considered and suggests that this may be useful for the design of inhibitors in the lead optimization phase of drug discovery.

MeSH Terms
Aniline Compounds/chemistry Aurora Kinases Binding Sites Cyclin-Dependent Kinase 2/antagonists & inhibitors Mitogen-Activated Protein Kinase 10/antagonists & inhibitors Models, Molecular Morpholines/chemistry Piperidines/chemistry Protein Conformation Protein Serine-Threonine Kinases/antagonists & inhibitors,chemistry Pyridines/chemistry Pyrimidines/chemistry Quantitative Structure-Activity Relationship Thermodynamics p38 Mitogen-Activated Protein Kinases/antagonists & inhibitors
Chemicals
Aniline Compounds Morpholines Piperidines Pyridines Pyrimidines Mitogen-Activated Protein Kinase 10 Aurora Kinases Protein Serine-Threonine Kinases Cyclin-Dependent Kinase 2 p38 Mitogen-Activated Protein Kinases
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Lyne Paul D
Cancer Discovery, AstraZeneca R&D Boston, 35 Gatehouse Drive, Waltham Massachusetts 02451, USA. paul.lyne@astrazeneca.com
Lamb Michelle L
Saeh Jamal C
Article Info
Journal
Journal of medicinal chemistry
Abbr.
J Med Chem
ISSN
0022-2623
Published
2006-08-10
Pages
4805-8
Language
English
Region
United States
NLM ID
9716531
Subset
IM
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