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PMID: 16608701 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Modelling transcriptional feedback loops: the role of Gro/TLE1 in Hes1 oscillations.

Bernard S, Cajavec B, Pujo-Menjouet L, Mackey MC, Herzel H

Abstract

The transcriptional repressor Hes1, a basic helix-loop-helix family protein, periodically changes its expression in the presomitic mesoderm. Its periodic pattern of expression is retained in a number of cultured murine cell lines. In this paper, we introduce an extended mathematical model for Hes1 oscillatory expression that includes regulation of Hes1 transcription by Drosophila Groucho (Gro) or its vertebrate counterpart, the transducine-like enhancer of split/Groucho-related gene product 1 (TLE1). Gro/TLE1 is a necessary corepressor required by a number of DNA-binding transcriptional repressors, including Hes1. Models of direct repression via Hes1 typically display an expression overshoot after transcription initiation which is not seen in the experimental data. However, numerical simulation and theoretical predictions of our model show that the cofactor Gro/TLE1 reduces the overshoot and is thus necessary for a rapid and finely tuned response of Hes1 to activation signals. Further, from detailed linear stability and numerical bifurcation analysis and simulations, we conclude that the cooperativity coefficient (h) for Hes1 self-repression should be large (i.e. h>or=4). Finally, we introduce the characteristic turnaround duration, and show that for our model the duration of the repression loop is between 40 and 60 min.

MeSH Terms
Animals Basic Helix-Loop-Helix Transcription Factors/genetics Biological Clocks/genetics Computer Simulation Drosophila Drosophila Proteins/genetics Feedback/physiology Gene Expression Regulation/genetics Homeodomain Proteins/genetics Models, Genetic Transcription Factor HES-1 Transcription, Genetic/genetics Transcriptional Activation/genetics
Chemicals
Basic Helix-Loop-Helix Transcription Factors Drosophila Proteins Homeodomain Proteins Transcription Factor HES-1 HES1 protein, human
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Bernard Samuel
Institute for Theoretical Biology, Humboldt University, Invalidenstrasse 43, 10115 Berlin, Germany.
Cajavec Branka
Pujo-Menjouet Laurent
Mackey Michael C
Herzel Hanspeter
Article Info
Journal
Philosophical transactions. Series A, Mathematical, physical, and engineering sciences
Abbr.
Philos Trans A Math Phys Eng Sci
ISSN
1364-503X
Published
2006-05-15
Pages
1155-70
Language
English
Region
England
NLM ID
101133385
Subset
IM
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