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PMID: 16575211 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Review

Multiple-criterion evaluation of reported mutations: a proposed scoring system for the intragenic somatic mutation literature.

Cancer biology & therapy ·Vol. 5 ·No. 4 ·2006-04-00 ·Pages 360-70

Winter JM, Brody JR, Kern SE

Abstract

In an accompanying paper, we review the theoretical principles of tumor mutations and the observed patterns of mutations in the cancer literature. These patterns are discussed in the context of a perceived dichotomy in quality that exists among mutation reports. Due to the frequency of mis-reporting, a systematic approach to the somatic mutation literature in human cancer is needed. We propose a multiple-criterion numerical tool, referred to as the scoring SISTM (System for Intragenic Somatic Tumor Mutations), which effectively discriminates promising and unpromising somatic mutation reports in human cancer. Reports are assessed on 12 criteria, and are given a final score of 15 or less. Scores in the range of 10 to 15 are suggestive of well-presented reports of disease-inducing somatic mutations. Reports with scores less than 10 should be viewed with skepticism.

MeSH Terms
Biomarkers, Tumor/genetics DNA Mutational Analysis Humans Loss of Heterozygosity Microsatellite Repeats Mutation Mutation, Missense Neoplasms/genetics Research Design
Chemicals
Biomarkers, Tumor
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Winter Jordan M
Department of Surgery, The Johns Hopkins University School of Medicine, Baltimore, Maryland 21231, USA.
Brody Jonathan R
Kern Scott E
Article Info
Journal
Cancer biology & therapy
Abbr.
Cancer Biol Ther
ISSN
1538-4047
Published
2006-04-00
Epub
2006-00-01
Pages
360-70
Language
English
Region
United States
NLM ID
101137842
Subset
IM
Grants
NCI NIH HHS · CA 62924 · United States
NIDDK NIH HHS · T32-DK007713 · United States
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