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PMID: 16447071 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

The alpha-tubulin gene AmTuba1: a marker for rapid mycelial growth in the ectomycorrhizal basidiomycete Amanita muscaria.

Current genetics ·Vol. 49 ·No. 5 ·2006-05-00 ·Pages 294-301

Tarkka MT, Schrey S, Nehls U

Abstract

The apical extension of hyphae is of central importance for extensive spread of fungal mycelium in forest soils and for effective ectomycorrhiza development. Since the tubulin cytoskeleton is known to be important for fungal tip growth, we have investigated the expression of an alpha-tubulin gene from the ectomycorrhizal basidiomycete Amanita muscaria (AmTuba1). The phylogenetic analysis of protein sequences revealed the existence of two subgroups of alpha-tubulins in homobasidiomycetes, clearly distinguishable by defined amino acids. AmTuba1 belongs to subgroup1. The AmTuba1 transcript level is related to mycelial growth rate. Growth induction of carbohydrate starved (non-growing) hyphae resulted in an enhanced AmTuba1 expression as soon as hyphal growth started, reaching a maximum at highest mycelial growth rate. Bacterium-induced hyphal elongation also leads to increased AmTuba1 transcript levels. In mature A. muscaria/P. abies ectomycorrhizas, where fungal hyphae are highly branched, and slowly growing, AmTuba1 expression were even lower than in carbohydrate-starved mycelium, indicating a further down-regulation of gene expression in symbiosis. In conclusion, our analyses show that the AmTuba1 gene can be used as a marker for active apical extension in fly agaric, and that alpha-tubulin proteins are promising tools for the classification of fungi.

MeSH Terms
Amanita/genetics,growth & development Biomarkers Fungal Proteins/classification,genetics Genes, Fungal Hyphae/genetics,growth & development Phylogeny Tubulin/classification,genetics
Chemicals
Biomarkers Fungal Proteins Tubulin
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Tarkka Mika T
Faculty of Biology, Institute of Botany, Physiological Ecology of Plants, University of Tübingen, Auf der Morgenstelle 1, 72076, Tübingen, Germany.
Schrey Silvia
Nehls Uwe
References (26)
26 references, click to expand
  1. Transcriptional responses of Paxillus involutus and Betula pendula during formation of ectomycorrhizal root tissue.
    Mol Plant Microbe Interact. 2004 Feb;17(2):202-15 PMID: 14964534
  2. Cloning, sequence and expression of a beta-tubulin-encoding gene in the homobasidiomycete Schizophyllum commune.
    Gene. 1992 Oct 1;119(2):175-82 PMID: 1398097
  3. Two phylogenetically highly distinct beta-tubulin genes of the basidiomycete Suillus bovinus.
    Curr Genet. 2005 Apr;47(4):253-63 PMID: 15770509
  4. Mycorrhiza helper bacterium Streptomyces AcH 505 induces differential gene expression in the ectomycorrhizal fungus Amanita muscaria.
    New Phytol. 2005 Oct;168(1):205-16 PMID: 16159334
  5. The beta-tubulin-encoding gene from Microbotryum violaceum: unusual in a variety of ways.
    Curr Genet. 2001 Jun;39(4):253-63 PMID: 11453255
  6. Congruent evidence from alpha-tubulin and beta-tubulin gene phylogenies for a zygomycete origin of microsporidia.
    Fungal Genet Biol. 2003 Apr;38(3):298-309 PMID: 12684019
  7. Microtubules are dispensable for the initial pathogenic development but required for long-distance hyphal growth in the corn smut fungus Ustilago maydis.
    Mol Biol Cell. 2005 Jun;16(6):2746-58 PMID: 15829564
  8. Sugar- and nitrogen-dependent regulation of an Amanita muscaria phenylalanine ammonium lyase gene.
    J Bacteriol. 1999 Mar;181(6):1931-3 PMID: 10074091
  9. Nuclear movement is beta--tubulin-dependent in Aspergillus nidulans.
    Cell. 1980 Jan;19(1):255-62 PMID: 6986988
  10. Spatial patterns of gene expression in the extramatrical mycelium and mycorrhizal root tips formed by the ectomycorrhizal fungus Paxillus involutus in association with birch (Betula pendula) seedlings in soil microcosms.
    New Phytol. 2005 Aug;167(2):579-96 PMID: 15998408
  11. Microtubule cytoskeleton in hyphal growth. Response to nocodazole in a sensitive and a tolerant strain of the homobasidiomycete Schizophyllum commune.
    Eur J Cell Biol. 1994 Jun;64(1):131-41 PMID: 7957301
  12. The influence of ectotrophic mycorrhizal fungi on the resistance of pine roots to pathogenic infections. II. Production, identification, and biological activity of antibiotics produced by Leucopaxillus cerealis var. piceina.
    Phytopathology. 1969 Apr;59(4):411-7 PMID: 5811914
  13. Carbon allocation in ectomycorrhizas: identification and expression analysis of an Amanita muscaria monosaccharide transporter.
    Mol Plant Microbe Interact. 1998 Mar;11(3):167-76 PMID: 9487692
  14. Characterization of small GTPases Cdc42 and Rac and the relationship between Cdc42 and actin cytoskeleton in vegetative and ectomycorrhizal hyphae of Suillus bovinus.
    Mol Plant Microbe Interact. 2001 Feb;14(2):135-44 PMID: 11204776
  15. Effects of MBC on hyphal tip organization, growth, and mitosis of Fusarium acuminatum, and their antagonism by D2O.
    Protoplasma. 1977;92(3-4):195-210 PMID: 910080
  16. Structure-function relationships in yeast tubulins.
    Mol Biol Cell. 2000 May;11(5):1887-903 PMID: 10793159
  17. Sebacinales: a hitherto overlooked cosm of heterobasidiomycetes with a broad mycorrhizal potential.
    Mycol Res. 2004 Sep;108(Pt 9):1003-10 PMID: 15506013
  18. Microtubules, but not actin microfilaments, regulate vacuole motility and morphology in hyphae of Pisolithus tinctorius.
    Cell Motil Cytoskeleton. 1999;42(2):114-24 PMID: 10215421
  19. The two alpha-tubulin isotypes in budding yeast have opposing effects on microtubule dynamics in vitro.
    EMBO Rep. 2003 Jan;4(1):94-9 PMID: 12524528
  20. Evolutionary relationships among beta-tubulin gene sequences of basidiomycetous fungi.
    Mycol Res. 2004 Nov;108(Pt 11):1257-63 PMID: 15587059
  21. MRBAYES: Bayesian inference of phylogenetic trees.
    Bioinformatics. 2001 Aug;17(8):754-5 PMID: 11524383
  22. Arbuscular mycorrhizal fungi (Glomeromycota) harbour ancient fungal tubulin genes that resemble those of the chytrids (Chytridiomycota).
    Fungal Genet Biol. 2004 Nov;41(11):1037-45 PMID: 15465392
  23. Transcript patterns associated with ectomycorrhiza development in Eucalyptus globulus and Pisolithus microcarpus.
    New Phytol. 2005 Feb;165(2):599-611 PMID: 15720670
  24. Microtubules in the fungal pathogen Ustilago maydis are highly dynamic and determine cell polarity.
    J Cell Sci. 2001 Feb;114(Pt 3):609-22 PMID: 11171329
  25. The role of microtubules in rapid hyphal tip growth of Aspergillus nidulans.
    Mol Biol Cell. 2005 Feb;16(2):918-26 PMID: 15548594
  26. Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits.
    Am J Bot. 2004 Oct;91(10):1446-80 PMID: 21652303
Article Info
Journal
Current genetics
Abbr.
Curr Genet
ISSN
0172-8083
Published
2006-05-00
Epub
2006-00-31
Pages
294-301
Language
English
Region
United States
NLM ID
8004904
Subset
IM
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