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PMID: 16381837 Published · ppublish English Journal Article Research Support, N.I.H., Extramural

GenBank.

Nucleic acids research ·Vol. 34 ·No. Database issue ·2006-01-01 ·Pages D16-20

Benson DA, Karsch-Mizrachi I, Lipman DJ, Ostell J, Wheeler DL

Abstract

GenBank (R) is a comprehensive database that contains publicly available DNA sequences for more than 205 000 named organisms, obtained primarily through submissions from individual laboratories and batch submissions from large-scale sequencing projects. Most submissions are made using the Web-based BankIt or standalone Sequin programs and accession numbers are assigned by GenBank staff upon receipt. Daily data exchange with the EMBL Data Library in Europe and the DNA Data Bank of Japan ensures worldwide coverage. GenBank is accessible through NCBI's retrieval system, Entrez, which integrates data from the major DNA and protein sequence databases along with taxonomy, genome, mapping, protein structure and domain information, and the biomedical journal literature via PubMed. BLAST provides sequence similarity searches of GenBank and other sequence databases. Complete bimonthly releases and daily updates of the GenBank database are available by FTP. To access GenBank and its related retrieval and analysis services, go to the NCBI Homepage at www.ncbi.nlm.nih.gov.

MeSH Terms
Animals Base Sequence Cattle DNA/chemistry DNA, Complementary/chemistry Databases, Nucleic Acid Expressed Sequence Tags/chemistry Genomics Humans Internet Mice Rats Sequence Tagged Sites User-Computer Interface
Chemicals
DNA, Complementary DNA
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Benson Dennis A
National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA.
Karsch-Mizrachi Ilene
Lipman David J
Ostell James
Wheeler David L
References (10)
10 references, click to expand
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Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
1362-4962
Published
2006-01-01
Pages
D16-20
Language
English
Region
England
NLM ID
0411011
PMCID
PMC1347519
Subset
IM
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