Home LiteratureArticle Details
PMID: 16143967 Published · ppublish English Journal Article

Cross-validated Cox regression on microarray gene expression data.

Statistics in medicine ·Vol. 25 ·No. 18 ·2006-09-30 ·Pages 3201-16

van Houwelingen HC, Bruinsma T, Hart AA, Van't Veer LJ, Wessels LF

Abstract

This paper describes how penalized Cox regression, in combination with cross-validated partial likelihood can be employed to obtain reliable survival prediction models for high dimensional microarray data. The suggested procedure is demonstrated on a breast cancer survival data set consisting of 295 tumours as collected in the National Cancer Institute in Amsterdam and previously reported in more general papers. The main aim of this paper it to show how generally accepted biostatistical procedures can be employed to analyse high-dimensional data.

MeSH Terms
Breast Neoplasms/genetics Carcinoma/genetics Data Interpretation, Statistical Female Gene Expression Humans Kaplan-Meier Estimate Middle Aged Netherlands Oligonucleotide Array Sequence Analysis/methods Predictive Value of Tests Proportional Hazards Models
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
van Houwelingen Hans C
Department of Medical Statistics and Bioinformatics, Leiden University Medical Center, P.O. Box 9604, 2300 RC Leiden, The Netherlands. jcvanhouwelingen@lumc.nl
Bruinsma Tako
Hart Augustinus A M
Van't Veer Laura J
Wessels Lodewyk F A
Article Info
Journal
Statistics in medicine
Abbr.
Stat Med
ISSN
0277-6715
Published
2006-09-30
Pages
3201-16
Language
English
Region
England
NLM ID
8215016
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com