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PMID: 16030072 Published · ppublish English Journal Article

GeneCruiser: a web service for the annotation of microarray data.

Bioinformatics (Oxford, England) ·Vol. 21 ·No. 18 ·2005-09-15 ·Pages 3681-2

Liefeld T, Reich M, Gould J, Zhang P, Tamayo P, Mesirov JP

Abstract

GeneCruiser is a web service allowing users to annotate their genomic data by mapping microarray feature identifiers to gene identifiers from databases, such as UniGene, while providing links to web resources, such as the UCSC Genome Browser. It relies on a regularly updated database that retrieves and indexes the mappings between microarray probes and genomic databases. Genes are identified using the Life Sciences Identifier standard. GeneCruiser is freely available in the following forms: Web service and Web application, http://www.genecruiser.org; GenePattern, GeneCruiser access has been integrated into our microarray analysis platform, GenePattern. http://www.genepattern.org.

MeSH Terms
Animals Computational Biology/instrumentation,methods Computer Graphics Database Management Systems Databases, Genetic Databases, Protein Gene Expression Profiling/methods Genome Humans Information Storage and Retrieval/methods Internet Mice Oligonucleotide Array Sequence Analysis Software User-Computer Interface
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Liefeld Ted
Broad Institute of MIT and Harvard, Cambridge, MA 02141, USA. liefeld@broad.mit.edu
Reich Michael
Gould Joshua
Zhang Peili
Tamayo Pablo
Mesirov Jill P
Article Info
Journal
Bioinformatics (Oxford, England)
Abbr.
Bioinformatics
ISSN
1367-4803
Published
2005-09-15
Epub
2005-00-19
Pages
3681-2
Language
English
Region
England
NLM ID
9808944
Subset
IM
Analysis Services
Analysis Services

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