Abstract
Naturally emerging and deliberately released pathogens demand new detection strategies to allow early recognition and containment. We describe a diagnostic system for rapid, sensitive, multiplex discrimination of microbial gene sequences and report its application for detecting 22 respiratory pathogens in clinical samples.
MeSH Terms
Bacterial Infections/diagnosis
Bronchoalveolar Lavage Fluid/microbiology,virology
Humans
Nasal Lavage Fluid/microbiology,virology
RNA, Bacterial/chemistry,genetics
RNA, Viral/chemistry,genetics
Respiratory Tract Infections/diagnosis,microbiology,virology
Reverse Transcriptase Polymerase Chain Reaction/methods
Sputum/microbiology,virology
Virus Diseases/diagnosis
Chemicals
RNA, Bacterial
RNA, Viral
Authors & Affiliations
13 authors, click to expand affiliations / ORCID
Briese Thomas
Columbia University, New York, NY 10032, USA.
Palacios Gustavo
Kokoris Mark
Jabado Omar
Liu Zhiqiang
Renwick Neil
Kapoor Vishal
Casas Inmaculada
Pozo Francisco
Limberger Ron
Perez-Brena Pilar
Ju Jingyue
Lipkin W Ian
References (12)
12 references, click to expand
-
Multiplex detection of four pathogenic retroviruses using molecular beacons.
Proc Natl Acad Sci U S A. 1999 May 25;96(11):6394-9
PMID: 10339598
-
Molecular diagnosis of influenza.
Rev Med Virol. 2002 Nov-Dec;12(6):375-89
PMID: 12410529
-
Rapid identification of nine microorganisms causing acute respiratory tract infections by single-tube multiplex reverse transcription-PCR: feasibility study.
J Clin Microbiol. 1999 Jan;37(1):1-7
PMID: 9854054
-
Simultaneous detection of fourteen respiratory viruses in clinical specimens by two multiplex reverse transcription nested-PCR assays.
J Med Virol. 2004 Mar;72(3):484-95
PMID: 14748074
-
4-(Trifluoromethyl)-2,3,5,6-tetrafluorobenzyl bromide as a new electrophoric derivatizing reagent.
J Chromatogr. 1993 Jul 9;641(2):400-4
PMID: 8366162
-
Rapid simultaneous diagnosis of infections with respiratory syncytial viruses A and B, influenza viruses A and B, and human parainfluenza virus types 1, 2, and 3 by multiplex quantitative reverse transcription-polymerase chain reaction-enzyme hybridization assay (Hexaplex).
Clin Infect Dis. 1998 Jun;26(6):1397-402
PMID: 9636869
-
Multiplex PCR for typing and subtyping influenza and respiratory syncytial viruses.
J Clin Microbiol. 1998 Oct;36(10):2990-5
PMID: 9738055
-
Improved Utility of Photolabile Solid Phase Synthesis Supports for the Synthesis of Oligonucleotides Containing 3'-Hydroxyl Termini.
J Org Chem. 1996 Jan 26;61(2):525-529
PMID: 11666970
-
Detection of electrophore-labeled DNA and albumin by gas chromatography: labile amide electrophoric release tags.
Anal Chem. 1993 Feb 15;65(4):498-9
PMID: 8439013
-
Oligodeoxyribonucleotides with conjugated dihydropyrroloindole oligopeptides: preparation and hybridization properties.
Bioconjug Chem. 1995 Jul-Aug;6(4):418-26
PMID: 7578362
-
High-throughput SNP genotyping with the Masscode system.
Mol Diagn. 2000 Dec;5(4):329-40
PMID: 11172497
-
Simultaneous detection of Entamoeba histolytica, Giardia lamblia, and Cryptosporidium parvum in fecal samples by using multiplex real-time PCR.
J Clin Microbiol. 2004 Mar;42(3):1220-3
PMID: 15004079