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PMID: 15608240 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

The Mouse Genome Database (MGD): from genes to mice--a community resource for mouse biology.

Nucleic acids research ·Vol. 33 ·No. Database issue ·2005-01-01 ·Pages D471-5

Eppig JT, Bult CJ, Kadin JA, Richardson JE, Blake JA, Anagnostopoulos A, Baldarelli RM, Baya M, Beal JS, Bello SM, Boddy WJ, Bradt DW, Burkart DL, Butler NE, Campbell J, Cassell MA, Corbani LE, Cousins SL, Dahmen DJ, Dene H, Diehl AD, Drabkin HJ, Frazer KS, Frost P, Glass LH, Goldsmith CW, Grant PL, Lennon-Pierce M, Lewis J, Lu I, Maltais LJ, McAndrews-Hill M, McClellan L, Miers DB, Miller LA, Ni L, Ormsby JE, Qi D, Reddy TB, Reed DJ, Richards-Smith B, Shaw DR, Sinclair R, Smith CL, Szauter P, Walker MB, Walton DO, Washburn LL, Witham IT, Zhu Y, Mouse Genome Database Group

Abstract

The Mouse Genome Database (MGD) forms the core of the Mouse Genome Informatics (MGI) system (http://www.informatics.jax.org), a model organism database resource for the laboratory mouse. MGD provides essential integration of experimental knowledge for the mouse system with information annotated from both literature and online sources. MGD curates and presents consensus and experimental data representations of genotype (sequence) through phenotype information, including highly detailed reports about genes and gene products. Primary foci of integration are through representations of relationships among genes, sequences and phenotypes. MGD collaborates with other bioinformatics groups to curate a definitive set of information about the laboratory mouse and to build and implement the data and semantic standards that are essential for comparative genome analysis. Recent improvements in MGD discussed here include the enhancement of phenotype resources, the re-development of the International Mouse Strain Resource, IMSR, the update of mammalian orthology datasets and the electronic publication of classic books in mouse genetics.

MeSH Terms
Animals Databases, Genetic Genes Genome Genomics Genotype Internet Mice/genetics Mice, Mutant Strains Phenotype Systems Integration User-Computer Interface
Authors & Affiliations
51 authors, click to expand affiliations / ORCID
Eppig Janan T
The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA.
Bult Carol J
Kadin James A
Richardson Joel E
Blake Judith A
Anagnostopoulos A
Baldarelli R M
Baya M
Beal J S
Bello S M
Boddy W J
Bradt D W
Burkart D L
Butler N E
Campbell J
Cassell M A
Corbani L E
Cousins S L
Dahmen D J
Dene H
Diehl A D
Drabkin H J
Frazer K S
Frost P
Glass L H
Goldsmith C W
Grant P L
Lennon-Pierce M
Lewis J
Lu I
Maltais L J
McAndrews-Hill M
McClellan L
Miers D B
Miller L A
Ni L
Ormsby J E
Qi D
Reddy T B K
Reed D J
Richards-Smith B
Shaw D R
Sinclair R
Smith C L
Szauter P
Walker M B
Walton D O
Washburn L L
Witham I T
Zhu Y
Mouse Genome Database Group
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9 references, click to expand
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Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
1362-4962
Published
2005-01-01
Pages
D471-5
Language
English
Region
England
NLM ID
0411011
PMCID
PMC540067
Subset
IM
Grants
NHGRI NIH HHS · P41 HG000330 · United States
NHGRI NIH HHS · HG00330 · United States
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