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PMID: 15606974 Published · ppublish English Evaluation Study Journal Article Research Support, U.S. Gov't, Non-P.H.S.

Vector NTI, a balanced all-in-one sequence analysis suite.

Briefings in bioinformatics ·Vol. 5 ·No. 4 ·2004-12-00 ·Pages 378-88

Lu G, Moriyama EN

Abstract

Vector NTI is a well-balanced desktop application integrated for molecular sequence analysis and biological data management. It has a centralised database and five application modules: Vector NTI, AlignX, BioAnnotator, ContigExpress and GenomBench. In this review, the features and functions available in this software are examined. These include database management, primer design, virtual cloning, alignments, sequence assembly, 3D molecular viewer and internet tools. Some problems encountered when using this software are also discussed. It is hoped that this review will introduce this software to more molecular biologists so they can make better-informed decisions when choosing computational tools to facilitate their everyday laboratory work. This tool can save time and enhance analysis but it requires some learning on the user's part and there are some issues that need to be addressed by the developer.

MeSH Terms
Algorithms Artificial Intelligence Chromosome Mapping/methods Database Management Systems Databases, Genetic Information Storage and Retrieval/methods Sequence Alignment/methods Sequence Analysis/methods Software Software Validation User-Computer Interface
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Lu Guoqing
School of Biological Sciences and Center for Biotechnology, University of Nebraska-Lincoln, Lincoln, NE 68588, USA. glu3@unl.edu
Moriyama Etsuko N
Article Info
Journal
Briefings in bioinformatics
Abbr.
Brief Bioinform
ISSN
1467-5463
Published
2004-12-00
Pages
378-88
Language
English
Region
England
NLM ID
100912837
Subset
IM
Analysis Services
Analysis Services

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