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PMID: 15496071 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

A set of nonpolar thymidine nucleoside analogues with gradually increasing size.

Organic letters ·Vol. 6 ·No. 22 ·2004-10-28 ·Pages 3949-52

Kim TW, Kool ET

Abstract

[structure: see text] We describe a series of nonpolar nucleoside analogues having similar shapes and gradually increasing size. The structure of the nucleobase thymine was mimicked with toluene derivatives, replacing O2/O4 with hydrogen, fluorine, chlorine, bromine, and iodine. Glycosidic bonds were formed by reactions of lithiated 2,4-dihalotoluenes with a deoxyribonolactone derivative. Structural analysis by NMR showed similar conformations across the series. The compounds are useful for study of the biological recognition of nucleotides and nucleic acids.

MeSH Terms
Crystallography, X-Ray Hydrocarbons, Halogenated/chemistry Lactones/chemistry Molecular Conformation Nucleic Acids/chemistry Nucleosides/chemical synthesis Nucleotides/chemistry Ribose/analogs & derivatives,chemistry Thymidine/analogs & derivatives,chemical synthesis Toluene/chemistry
Chemicals
Hydrocarbons, Halogenated Lactones Nucleic Acids Nucleosides Nucleotides ribonolactone Toluene Ribose Thymidine
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Kim Tae Woo
Department of Chemistry, Stanford University, Stanford, California 94305-5080, USA.
Kool Eric T
Article Info
Journal
Organic letters
Abbr.
Org Lett
ISSN
1523-7060
Published
2004-10-28
Pages
3949-52
Language
English
Region
United States
NLM ID
100890393
Subset
IM
Grants
NIBIB NIH HHS · EB002059 · United States
NIGMS NIH HHS · GM072705 · United States
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