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PMID: 15362103 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Molecular crowding reduces to a similar extent the diffusion of small solutes and macromolecules: measurement by fluorescence correlation spectroscopy.

Journal of molecular recognition : JMR ·Vol. 17 ·No. 5 ·2004-00-00 ·Pages 441-7

Dauty E, Verkman AS

Abstract

Aqueous environments in living cells are crowded, with up to >50 wt% small and macromolecule-size solutes. We investigated quantitatively one important consequence of molecular crowding--reduced diffusion of biologically important solutes. Fluorescence correlation spectroscopy (FCS) was used to measure the diffusion of a series of fluorescent small solutes and macromolecules. In water, diffusion coefficients (D(o)w) were (in cm2/s x 10(-8)): rhodamine green (270), albumin (52), dextrans (75, 10 kDa; 10, 500 kDa), double-stranded DNAs (96, 20 bp; 10, 1 kb; 3.4, 4.5 kb) and polystyrene nanospheres (5.4, 20 nm diameter; 2.3, 100 nm). Aqueous-phase diffusion (Dw) in solutions crowded with Ficoll-70 (0-60 wt%) was reduced by up to 650-fold in an exponential manner: Dw = D(o)w exp (-[C]/[C]exp), where [C]exp is the concentration (in wt%) of crowding agent reducing D(o)w by 63%. FCS data for all solutes and Ficoll-70 concentrations fitted well to a model of single-component, simple (non-anomalous) diffusion. Interestingly [C]exp were nearly identical (11+/-2 wt%, SD) for diffusion of the very different types of macromolecules in Ficoll-70 solutions. However, [C]exp was dependent on the nature of the crowding agent: for example, [C]exp for diffusion of rhodamine green was 30 wt% for glycerol and 16 wt% for 500 kDa dextran. Our results indicate that molecular crowding can greatly reduce aqueous-phase diffusion of biologically important macromolecules, and demonstrate a previously unrecognized insensitivity of crowding effects on the size and characteristics of the diffusing species.

MeSH Terms
Diffusion Ficoll/chemistry Macromolecular Substances/chemistry Solutions/chemistry Spectrometry, Fluorescence Water/chemistry
Chemicals
Macromolecular Substances Solutions Water Ficoll
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Dauty Emmanuel
Departments of Medicine and Physiology, Cardiovascular Research Institute, University of California, San Francisco, CA 94143, USA.
Verkman A S
Article Info
Journal
Journal of molecular recognition : JMR
Abbr.
J Mol Recognit
ISSN
0952-3499
Published
2004-00-00
Pages
441-7
Language
English
Region
England
NLM ID
9004580
Subset
IM
Grants
NIDDK NIH HHS · DK35124 · United States
NIBIB NIH HHS · EB00415 · United States
NEI NIH HHS · EY13574 · United States
NHLBI NIH HHS · HL59198 · United States
NHLBI NIH HHS · HL75856 · United States
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