Home LiteratureArticle Details
PMID: 15240889 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Cre-lox-regulated conditional RNA interference from transgenes.

Ventura A, Meissner A, Dillon CP, McManus M, Sharp PA, Van Parijs L, Jaenisch R, Jacks T

Abstract

We have generated two lentiviral vectors for conditional, Cre-lox-regulated, RNA interference. One vector allows for conditional activation, whereas the other permits conditional inactivation of short hairpin RNA (shRNA) expression. The former is based on a strategy in which the mouse U6 promoter has been modified by including a hybrid between a LoxP site and a TATA box. The ability to efficiently control shRNA expression by using these vectors was shown in cell-based experiments by knocking down p53, nucleophosmin and DNA methyltransferase 1. We also demonstrate the usefulness of this approach to achieve conditional, tissue-specific RNA interference in Cre-expressing transgenic mice. Combined with the growing array of Cre expression strategies, these vectors allow spatial and temporal control of shRNA expression in vivo and should facilitate functional genetic analysis in mammals.

MeSH Terms
Amino Acid Sequence Animals Genetic Vectors/genetics Integrases/genetics Lentivirus/genetics Mice Mice, Transgenic Molecular Sequence Data Nuclear Proteins/genetics Nucleophosmin RNA Interference Repressor Proteins/genetics Transgenes/genetics Tumor Suppressor Protein p53/genetics Viral Proteins/genetics
Chemicals
DMAP1 protein, human Dmap1 protein, mouse NPM1 protein, human Nuclear Proteins Repressor Proteins Tumor Suppressor Protein p53 Viral Proteins Nucleophosmin Cre recombinase Integrases
Authors & Affiliations
8 authors, click to expand affiliations / ORCID
Ventura Andrea
Department of Biology, Center for Cancer Research, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Meissner Alexander
Dillon Christopher P
McManus Michael
Sharp Phillip A
Van Parijs Luk
Jaenisch Rudolf
Jacks Tyler
References (28)
28 references, click to expand
  1. Survey and summary: transcription by RNA polymerases I and III.
    Nucleic Acids Res. 2000 Mar 15;28(6):1283-98 PMID: 10684922
  2. Transgenic RNA interference in ES cell-derived embryos recapitulates a genetic null phenotype.
    Nat Biotechnol. 2003 May;21(5):559-61 PMID: 12679785
  3. Aggregation chimeras. Combining ES cells, diploid and tetraploid embryos.
    Methods Mol Biol. 2001;158:135-54 PMID: 11236654
  4. Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells.
    Nature. 2001 May 24;411(6836):494-8 PMID: 11373684
  5. Hybrid vigor, fetal overgrowth, and viability of mice derived by nuclear cloning and tetraploid embryo complementation.
    Proc Natl Acad Sci U S A. 2001 May 22;98(11):6209-14 PMID: 11331774
  6. Cancer modeling in the modern era: progress and challenges.
    Cell. 2002 Jan 25;108(2):135-44 PMID: 11832204
  7. Methylation dynamics of imprinted genes in mouse germ cells.
    Genomics. 2002 Apr;79(4):530-8 PMID: 11944985
  8. A system for stable expression of short interfering RNAs in mammalian cells.
    Science. 2002 Apr 19;296(5567):550-3 PMID: 11910072
  9. Nucleophosmin regulates the stability and transcriptional activity of p53.
    Nat Cell Biol. 2002 Jul;4(7):529-33 PMID: 12080348
  10. Gene silencing in mammals by small interfering RNAs.
    Nat Rev Genet. 2002 Oct;3(10):737-47 PMID: 12360232
  11. Germline transmission of RNAi in mice.
    Nat Struct Biol. 2003 Feb;10(2):91-2 PMID: 12536207
  12. Site-directed mutagenesis by gene targeting in mouse embryo-derived stem cells.
    Cell. 1987 Nov 6;51(3):503-12 PMID: 2822260
  13. Targeted mutation of the DNA methyltransferase gene results in embryonic lethality.
    Cell. 1992 Jun 12;69(6):915-26 PMID: 1606615
  14. T-cell-specific deletion of a polypeptide N-acetylgalactosaminyl-transferase gene by site-directed recombination.
    Proc Natl Acad Sci U S A. 1995 Dec 19;92(26):12070-4 PMID: 8618846
  15. A lentivirus-based system to functionally silence genes in primary mammalian cells, stem cells and transgenic mice by RNA interference.
    Nat Genet. 2003 Mar;33(3):401-6 PMID: 12590264
  16. Killing the messenger: short RNAs that silence gene expression.
    Nat Rev Mol Cell Biol. 2003 Jun;4(6):457-67 PMID: 12778125
  17. Physical and functional interactions of the Arf tumor suppressor protein with nucleophosmin/B23.
    Mol Cell Biol. 2004 Feb;24(3):985-96 PMID: 14729947
  18. MicroRNAs: genomics, biogenesis, mechanism, and function.
    Cell. 2004 Jan 23;116(2):281-97 PMID: 14744438
  19. Dnmt1 expression in pre- and postimplantation embryogenesis and the maintenance of IAP silencing.
    Mol Cell Biol. 2004 Feb;24(4):1640-8 PMID: 14749379
  20. Conditional gene knock-down by CRE-dependent short interfering RNAs.
    EMBO Rep. 2004 Feb;5(2):178-82 PMID: 14726950
  21. Control of siRNA expression using the Cre-loxP recombination system.
    Nucleic Acids Res. 2004;32(7):e66 PMID: 15107481
  22. CRE recombinase-inducible RNA interference mediated by lentiviral vectors.
    Proc Natl Acad Sci U S A. 2004 May 11;101(19):7347-51 PMID: 15123829
  23. Cell lineage-specific undermethylation of mouse repetitive DNA.
    Nature. 1984 Jan 19-25;307(5948):284-6 PMID: 6694730
  24. Germ-line passage is required for establishment of methylation and expression patterns of imprinted but not of nonimprinted genes.
    Genes Dev. 1996 Apr 15;10(8):1008-20 PMID: 8608936
  25. Complementation of methylation deficiency in embryonic stem cells by a DNA methyltransferase minigene.
    Proc Natl Acad Sci U S A. 1996 Nov 12;93(23):12920-5 PMID: 8917520
  26. Role of nucleotide sequences of loxP spacer region in Cre-mediated recombination.
    Gene. 1998 Aug 17;216(1):55-65 PMID: 9714735
  27. How cells respond to interferons.
    Annu Rev Biochem. 1998;67:227-64 PMID: 9759489
  28. Conditional inactivation of Fgf4 reveals complexity of signalling during limb bud development.
    Nat Genet. 2000 May;25(1):83-6 PMID: 10802662
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
2004-07-13
Epub
2004-00-06
Pages
10380-5
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC478580
Subset
IM
Grants
NIGMS NIH HHS · R37 GM034277 · United States
NIGMS NIH HHS · R37-GM34277 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com